Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1424 ATGAAGAACAGAAAATCACCCTCCTTCGCCGTTACCGTCACAGTTGCCGTTTTCATCTCTTTATTACCAATATCCCATGCCATCGGCTCCGGCACCACCCTCGCCGTCACCGACGTTTCCGGCACCGTCTGCGGCGTGGTGGCATCGGAGCCGACGCGGCGCATTGCGTGCTACCGTGACGGACAAGTCATCGCCGTCGCGCCCAACGTGTCGTTTTCATCGATCTCCGGCGGCTGGAGCTACTTCTGCGGCCTGAGGTCCGGCAACTACAGCCTCCTCTGTTGGGACACCGTCTCAACCTTCCAAAGCAAGAGGCTTTACAACAATGACACTGTTCTATTCGAGAATCTTGCTGTCGGGGATTCCCAGGTTTGTGCCACCGTTGTCGGAACCGGAACAGCGTCGTGTTGGAGAACCAACGGTGCGTTTGAATTGGCTTCTGGGTCTGACGAATTCGCTTCTATTTCATCTGGGTCTGGTTTCTCTTGTGGAATTCTGAAGGGTAGTTATCAGGTTCGGTGTTGGGGAATTGGGTCTATTGCGAGGAGGATAGACAGTGAGTTTGGAAACATGTCTATGATGAGTCTCGTGGCTGGGGATTCACATGTTTGTGGATTGAATTCAAGTGGGTTTTTGGTTTGTAAAGGAAGTAACAGTTTTGGTCAAATTGATGCTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTTTGGCACTTGGAGCTGAGCATAGTTGTGCTATTAGAAGATCTAATGGTTCTGTCGTTTGTTGGGGTGGGAAAGGGTTATTTTCAGTTAATGTTACCAAAGGTGTTTCTTTTGAGGTTATTGTTTCTGGGTCAAATTTTACTTGTGGATTGACAACAAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGCCCAATAGTTCTTATTCTGCTTCAGGTTTTGAGCTTCCCTTGCCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGTATATATCCTCAGTCTCAATTTTTGTGTTCTGGTTCTGGTAGCATTTGCAAGCCACAACCTTGTAGGCCTCAAATGCCGTCACCACCATCACTGCCACCGCAGATGACTCCTCCGTCGGTGCCGGCTTCCCGGTCAAAGACGTTGACAAAGGGCTTATTGGCATTTGCCATTGTTGGATCAGTGGGAGGTGTTGCTGGTATTTGCACAGCAATTTATTGCTTGTGGACTGGGGTTTGTTTAGGGAAGAAGAAAATTCACAATTCTGTGCAGCCAACAATTACAAGAGGTGGCAGTTTCAACGGTGGTGGTGCTTCTAATCATAATAGCCCACCGTCAAGATCATCCACCATTAGGCGTCAGGGCTCGAGGATAATGAGGCGCCAACGGAGTGGAACCTCATCAACAAAACATCCAGATAGGGCAGAGGAGTTCACCCTGGCTGAGCTTGTTGCAGCCACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTTTATAGAGGCAAACTTGCTGATGGCCGCGAGGTGGCAATCAAAAGGGGTGAAACTGGTACTAAGATGAAGAAGTTCCAAGAGAAAGAGAGTGCATTTGAGTCTGAATTGGCCTTTTTGTCCCGTTTACACCACAAGCATTTGGTTAGGCTAGTTGGTTTTTGTGAGGAGAAGGATGAAAGACTCTTGGTGTATGAGTACATGAAAAATGGGGCATTATATGATCATTTGCATGACAAGAATAATGTGGACAAGAGTAGTAGTGTATTGAATTCTTGGAGAATGAGGATAAAAATTGCGCTGGATGCTTCGCGAGGAATTGAATATCTTCATAATTATGCAGTTCCTTCTATAATTCACAGGGATATCAAGTCTTCTAACATTCTCATTGACGCGACTTGGACGGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGAATCTGATCACGATTACCGGCCAACGAAGGCAGCCGGAACAGTCGGATACATTGATCCTGAATATTATGGTCTAAATGTGTTAACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTATTGTTAGAATTATTAACAGGAAAGAGAGCTATATTCAAGAATGATGAAAATGGAGGCACCCCAGTGAGTGTGGTAGACTTTGCAGTGCCTGCAATTTTAGCAGGCGAATTGGCGAAAATTTTGGACCCGAGGGTTGAACCACCAGAGTTGAATGAAACAGAAGCAGTGGAGCTGGTGGCATATACTGCTATGCATTGTGTAAATTTGGAAGGGAAAGATAGACCAACAATGGCTGACATTGTGGCCAATTTGGAGCGTGCTTTGGCTCTTTGTGATAGTAGTCATGTCAGCATTTCCAGTGGAACAATCTCCATTGTATCTGAATGA 2388 0.4606 MKNRKSPSFAVTVTVAVFISLLPISHAIGSGTTLAVTDVSGTVCGVVASEPTRRIACYRDGQVIAVAPNVSFSSISGGWSYFCGLRSGNYSLLCWDTVSTFQSKRLYNNDTVLFENLAVGDSQVCATVVGTGTASCWRTNGAFELASGSDEFASISSGSGFSCGILKGSYQVRCWGIGSIARRIDSEFGNMSMMSLVAGDSHVCGLNSSGFLVCKGSNSFGQIDAPEGGALEFSGLALGAEHSCAIRRSNGSVVCWGGKGLFSVNVTKGVSFEVIVSGSNFTCGLTTNNFSVICWGPGWPNSSYSASGFELPLPPILPGPCVQSSCSECGIYPQSQFLCSGSGSICKPQPCRPQMPSPPSLPPQMTPPSVPASRSKTLTKGLLAFAIVGSVGGVAGICTAIYCLWTGVCLGKKKIHNSVQPTITRGGSFNGGGASNHNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELVAATNNFSLENKIGAGSYGVVYRGKLADGREVAIKRGETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKSSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESDHDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSVVDFAVPAILAGELAKILDPRVEPPELNETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHVSISSGTISIVSE* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1424 795 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 11 793 - -
Apr9g1424 795 SUPERFAMILY Protein kinase-like (PK-like) 463 771 IPR011009 -
Apr9g1424 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Apr9g1424 795 MobiDBLite consensus disorder prediction 350 373 - -
Apr9g1424 795 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Apr9g1424 795 Gene3D Phosphorylase Kinase; domain 1 447 566 - -
Apr9g1424 795 Gene3D - 18 189 IPR009091 -
Apr9g1424 795 SUPERFAMILY RCC1/BLIP-II 24 258 IPR009091 -
Apr9g1424 795 MobiDBLite consensus disorder prediction 351 369 - -
Apr9g1424 795 ProSiteProfiles Protein kinase domain profile. 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1424 795 Gene3D - 190 308 IPR009091 -
Apr9g1424 795 Gene3D Transferase(Phosphotransferase) domain 1 567 785 - -
Apr9g1424 795 Pfam Protein kinase domain 487 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1424 795 MobiDBLite consensus disorder prediction 425 449 - -
Apr9g1424 795 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 11 793 IPR044815 GO:0004674
Apr9g1424 795 SMART serkin_6 486 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1424 795 MobiDBLite consensus disorder prediction 425 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1424 Apr-Chr9 23859183 23861972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1424 8 795 Receptor kinase-like Gene Family AT3G55950 61.172 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr9g1424 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1424 - - gmx:100782916 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1424 9 23859183 23861972 Apr10g2118 10 33844390 33845724 ECH
Apr9g1424 9 23859183 23861972 Apr9g1424 9 23859183 23861972 ECH
Apr10g2119 10 33847723 33849252 Apr9g1424 9 23859183 23861972 PCT