Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1415 ATGATGCCTCTAATAATGTTCCTTCTAAAGTTTGTTTCGCAATCCATCATGTTCATGTACATGACTCCAACTGCAATTGGCCTTGCTTTGAGTTCAGAATGTGATAAACTCGCTTTGCTTGACCTGAAGGAAAAGCTTACCAATGGCATACCTGATTCTCTCCCATCATGGAACAATTCTTTGCATTTCTGTGAGTGGCAGGGTGTTCAGTGTGGCCATCGCCACAAGAGAGTCACTACCTTGCATTTACAAAATCAAAATTGGGGTGGTACTTTGGGACCAGCTTTGGCAAATCTAACCTTCCTTAAAAGCCTCAATCTTTCCAATATTAATTTGCATGGTGAAATACCCACACAAGTTGGTCGTTTAAAGCGGTTGCAAGTTCTTGACTTGAGCAAAAATAATCTTCATGGTGAGGTTCCTATTGAGCTTTCTAACTGCTCAAATCTTGAGGTAATAAGCTTGCTGTACAATAAACTCACTGGGAAAGTACCCTCTTGGCTTGGATCTATGACACAGCTCACACAGTTGTTTCTTGGTGCCAATAATCTAGTGGGTACTATTCCACCTTCCATGGGAAATCTATCATCACTCCTGAATATATCTCTTTCAAGAAATAATTTGGAAGGAAATATACCTCATACCTTGGGTACGTTGTCAAATTTAGAACAGTTGTATCTTGGTTTAAATAGGTTGTCGGGTACCGTTCCTGATTCTCTTTATAACCTCTCAAATATTCGAGTTCTTGTTCTTGGGGAAAACCAATTATCTGGTACTCTTCCATCAAATTTGCAACGTAATCTTCACGCATTCTTGGTTGGGGGGAACCACTTCTCTGGAACTTTCCCATCCTCGATATCCAACCTCACTGGATTGAGATGGTTTGATATATCCAGCAATGGTTTTAAGGGGTCAATTCCTACTACTTTGGGAAGCTTAAGCAAACTTGAGAGGTTTAACATTGGTGATAATAGTTTTGGGAGTGGAAAAGCTCATGATTTGGACTTTCTCTCCTCATTAACCAATTGTACCCTATTGCAAGTGCTTATTTTGGAGGGCAATAAATTTGGTGGTGTGTTGCCTGATCTTATTGGTAACTTCTCTTCCAATCTCAATTGGCTTAGTATGGGGATTAATCAAATATCTGGAAGGATCACTGAAGGAATTGGACAACTAATCGGTTTAACTAACTTCATTATGATAGATAATTTCCTTGAGGGAACAATTCCAGATTCAATTGGAAACCTTAAAAGTCTAGTAAGATTGGCCTTGCAAGAAAACAAATTATCAGGTAACATTCCTACCGTCATTGGCAATCTTACCATGTTATCTGAATTTTATCTACACACCAATGAATTTGAAGGAAGCATTCCATCTACCATCAGATACTGCACCCGCATGCAATCATTTGGAGTTTCTGACAACAGCTTAAGTGGTGATATTCCTAACCAAACCTTTGGCAATCTAGAAGGTTTGGTAAATCTTGACCTATCCATCAACTCCTTCACCGGTTCCATTCCTTTGGAGTTTGGAAACTTGAAGCACCTTTCCTTGTTATATCTACATGAAAACAAGCTGTCTGGTGAAATTCCCTTAGAACTTAGTTCTTGTTTGGCATTAACAGAGCTCACACTGCAGAGAAACTTTTTCCATGGAAGTATACCTTCATTCTTGGGCTCTTTAAGGTCCCTTGAAATTCTAGACCTTTCTAGTAACAACTTCTCAAGCACAATCCCCATTGAACTAGAAAATCTGACTTTGGTGAGAACTTTGAACTTGTCCTCTAACCATCTTTGTGGTGAGGTTCCTATAGGAGGTGTCTTTAATAACATCACAGCAATTTCACTCATTGGAAACAAGGATCTCTGTGGGGGTATACAACAACTGAAGCTACCTGCATGCTCTAGGTCCCCTTGGAAGAAACACAAGTTGCCTCTTAAAAGCGAACTTATTCTCATCATTGCAATCGGTGGGGTTTTGTTCAGTTCCATAATATTTATCGGCCTCTACTATCTCAGGAAAAAATCCAAAATATCATCTTCTTTATCATCCTTGCAAAATAGGTACTCGAAGGTTTCTTATGGAGAGCTATATCAAGCAACCAATGGATTTTCTCCATGCAATTTAGTAGGCACTGGAAGCTTTGGTTCTGTTTACAAAGGATCACTCGTCCATTTTGAAAGACCTGTTGCTGTGAAGGTATTGAATCTTGAAACAAATGGGGCATCAAAGAGTTTCATGGCTGAATGTAAAGCCTTGGAAAAGATCAAGCACCCAAATCTTGTCAAGATCCTGACATTTTGTTCAACTTTTGATTACGATGGTGAAGTTTTCAAGGCTATAGTTTTTGAGTTCATGCATAATGGGAGTCTAGACAGGTTGTTGCACAGCAATGAAGAATGTGAGCCTAGAAATCTTAATCTACACCTTACACATAGAATAAGCATCGCTATTGATTTAGCTAATGCATTAGATTATCTTCATCATGATTCCGAGCAAGCTATAGTTCATTGTGATATTAAGCCAAGCAATGTTCTTCTTGATGGTGACCTTGTTGCTTACATGGGAGACTTCGGATTAGCTAGGCTCCTTCACGAGGCCTCAGGGCATTCCAGTAGAGATCAAATTAGTTCCTCGGCAATTAAGGGAACCATTGGATATGTTGCCCCAGAGTATGGATTGGGTGGCCCAGTATCACCACAAGGAGATATCTACAGCTATGGAATTCTTCTATTGGAGATGCTCACTGGAAAGAAACCAACGGATAGCATGTTTTGTGAGGGTCTAAGCCTGCACAAATTCTGTAAGATGGCAATTCCAGAAGGAATCACTGAGATTGTTGATTCTCGTTTGCTAATCCCATTTGCTAAAGAATTAACAGTGGTTAAGGAAGGTGACATCAGGGAGTGTCTGGTGTCTTTTGCAAGGATTGGAGTTGCATGTTCTGCAGAATTTCCTGCTCAGCGAATGAATATTAAAGATGTTACAAAGGAGTTGCATGCAATTAAACAGAAGCTGCCCTGCTAG 3027 0.3981 MMPLIMFLLKFVSQSIMFMYMTPTAIGLALSSECDKLALLDLKEKLTNGIPDSLPSWNNSLHFCEWQGVQCGHRHKRVTTLHLQNQNWGGTLGPALANLTFLKSLNLSNINLHGEIPTQVGRLKRLQVLDLSKNNLHGEVPIELSNCSNLEVISLLYNKLTGKVPSWLGSMTQLTQLFLGANNLVGTIPPSMGNLSSLLNISLSRNNLEGNIPHTLGTLSNLEQLYLGLNRLSGTVPDSLYNLSNIRVLVLGENQLSGTLPSNLQRNLHAFLVGGNHFSGTFPSSISNLTGLRWFDISSNGFKGSIPTTLGSLSKLERFNIGDNSFGSGKAHDLDFLSSLTNCTLLQVLILEGNKFGGVLPDLIGNFSSNLNWLSMGINQISGRITEGIGQLIGLTNFIMIDNFLEGTIPDSIGNLKSLVRLALQENKLSGNIPTVIGNLTMLSEFYLHTNEFEGSIPSTIRYCTRMQSFGVSDNSLSGDIPNQTFGNLEGLVNLDLSINSFTGSIPLEFGNLKHLSLLYLHENKLSGEIPLELSSCLALTELTLQRNFFHGSIPSFLGSLRSLEILDLSSNNFSSTIPIELENLTLVRTLNLSSNHLCGEVPIGGVFNNITAISLIGNKDLCGGIQQLKLPACSRSPWKKHKLPLKSELILIIAIGGVLFSSIIFIGLYYLRKKSKISSSLSSLQNRYSKVSYGELYQATNGFSPCNLVGTGSFGSVYKGSLVHFERPVAVKVLNLETNGASKSFMAECKALEKIKHPNLVKILTFCSTFDYDGEVFKAIVFEFMHNGSLDRLLHSNEECEPRNLNLHLTHRISIAIDLANALDYLHHDSEQAIVHCDIKPSNVLLDGDLVAYMGDFGLARLLHEASGHSSRDQISSSAIKGTIGYVAPEYGLGGPVSPQGDIYSYGILLLEMLTGKKPTDSMFCEGLSLHKFCKMAIPEGITEIVDSRLLIPFAKELTVVKEGDIRECLVSFARIGVACSAEFPAQRMNIKDVTKELHAIKQKLPC* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1415 1008 ProSitePatterns Protein kinases ATP-binding region signature. 710 733 IPR017441 GO:0005524
Apr9g1415 1008 Gene3D Ribonuclease Inhibitor 269 332 IPR032675 -
Apr9g1415 1008 Gene3D Ribonuclease Inhibitor 194 268 IPR032675 -
Apr9g1415 1008 SMART LRR_typ_2 123 147 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 513 537 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 219 242 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 416 440 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 585 610 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 561 584 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 243 267 IPR003591 -
Apr9g1415 1008 SMART LRR_typ_2 171 195 IPR003591 -
Apr9g1415 1008 Pfam Protein kinase domain 708 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1415 1008 ProSiteProfiles Leucine-rich repeat profile. 563 586 IPR001611 GO:0005515
Apr9g1415 1008 Pfam Leucine rich repeat 540 598 IPR001611 GO:0005515
Apr9g1415 1008 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Apr9g1415 1008 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Apr9g1415 1008 SUPERFAMILY L domain-like 368 624 - -
Apr9g1415 1008 Gene3D Transferase(Phosphotransferase) domain 1 786 1007 - -
Apr9g1415 1008 ProSiteProfiles Protein kinase domain profile. 704 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1415 1008 SUPERFAMILY L domain-like 59 368 - -
Apr9g1415 1008 SMART serkin_6 704 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1415 1008 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Apr9g1415 1008 Gene3D Phosphorylase Kinase; domain 1 668 785 - -
Apr9g1415 1008 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 1008 - -
Apr9g1415 1008 Gene3D Ribonuclease Inhibitor 333 642 IPR032675 -
Apr9g1415 1008 PANTHER LRR RECEPTOR-LIKE KINASE 29 1008 - -
Apr9g1415 1008 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Apr9g1415 1008 SUPERFAMILY Protein kinase-like (PK-like) 684 999 IPR011009 -
Apr9g1415 1008 SMART LRR_sd22_2 219 245 - -
Apr9g1415 1008 SMART LRR_sd22_2 123 152 - -
Apr9g1415 1008 SMART LRR_sd22_2 416 442 - -
Apr9g1415 1008 SMART LRR_sd22_2 171 197 - -
Apr9g1415 1008 SMART LRR_sd22_2 561 582 - -
Apr9g1415 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1415 Apr-Chr9 23771469 23774996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1415 29 1006 Receptor kinase-like Gene Family AT3G47570 44.052 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr9g1415 Pkinase 5.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1415 - - gmx:100777490 1436.4