Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1406 ATGCCTTCTTCTGAAACCACCATAGTCTCAAAATGCACCGTATTCCCAGACCGAAAGTCCACTCTGAAAAACCTCAAACTCTCAGTTTCGGACCTCCCCATGTTGTCCTGCCACTACATCCAAAAGGGATGCCTATTCACCCAACCTTCTATCCCTTTCCACACTCTCATCCCTATCCTCAAATCTGCTCTCTCTCGAACTCTCTCTCTCTTTCCCCCTCTTGCCGGCCGTCTCACCACCGATTCCGATGGTTACGTCTACATCACCTGTAACGATGCCGGCGTCGATTTCCTCCACGCCAATGCCACCGGACTTTGCATCTGCGACCTATTGTCCCCACTCGACGTCCACGATTCCTTCAAGGAATTCTTCACCTTCGATAGCAAAGTCAGTTACACCGGCCATTCCTCTCCGATTTTGGCCGTCCAGGTCACCCAACTCGCCGATGGCGTTTTCATTGGCTGCGCCGTCAATCACGCCGTCACCGACGGCACCTCCTTTTGGAATTTCTTCAATACCTTCGCGCAGGTCTACAGAGGAGCCAGTAAGTGCCTCCAAAACGTCCCGGACTTCCGCCGCGAGTCCGTTCTAATCTCCGACGCCGTTCTCCGGTTGCCGGAGGGCGGTCCTTGCGTGACGTTCGACGCCGACGCGCCGTTGCGAGAGAGAATCTTCAGCTTCAGCCGCGACGACATTCAGAAGCTGAAAGCCCGAGCAAACAACCGCCGGTGGCCGGAGAATAACAGCGCCGCTGAGTTGATGGGGAAACAGAGCAACGATCCTCACGTGAAGGAGAACAGTAAAGTCGTCACGATTCTCGAGAACTGGTTCAAGAGCACAGTTAATTCAAAACAGCAAACGGTCACCGAAACGGTTGAGATTTCGTCGTTTCAATCGGTGTGCGCGCTGCTGTGGCGCGCTGTCACGCGCGCGAGGAAGTTTCCAGCGTCCAAAACGACGACGTTTAGAATGGCAGTTAACTGTCGCCACCGGATAGAACCTAAATTGGAAGCGTACTACTTCGGGAACGCGATTCAGAGCGTGCCTACTTATGCTTCTGCGGGCGAAGTAGTGTCAAGGGATCTACGGTGGTGCGCGGAGCAGTTGAACAAGAACGTGAGGGCGCACGACGACGCTATGGTGCGGCGCTTCGTAGAGGATTGGGAGAGGAACCCGAGGTGCTTCCCGCTTGGGAACCCCGACGGTGCATCGATCACTATGGGTAGTTCACCGAGGTTTCCAATGTACGACAACGATTTCGGTTGGGGGAAGCCTATGGCGGTGCGGAGTGGAAGGGCGAACAAATTTGACGGTAAGATTTCGGCGTTTCCCGGTAGAGATGGCAGCGGAACCGTTGATTTGGAGGTGGTGTTGGCGCCCGAAACAATGGCGGGGCTGGAATCTGATCCCGAGTTCATGCTATACGCCACGAGGCAGTCATGA 1443 0.5482 MPSSETTIVSKCTVFPDRKSTLKNLKLSVSDLPMLSCHYIQKGCLFTQPSIPFHTLIPILKSALSRTLSLFPPLAGRLTTDSDGYVYITCNDAGVDFLHANATGLCICDLLSPLDVHDSFKEFFTFDSKVSYTGHSSPILAVQVTQLADGVFIGCAVNHAVTDGTSFWNFFNTFAQVYRGASKCLQNVPDFRRESVLISDAVLRLPEGGPCVTFDADAPLRERIFSFSRDDIQKLKARANNRRWPENNSAAELMGKQSNDPHVKENSKVVTILENWFKSTVNSKQQTVTETVEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRIEPKLEAYYFGNAIQSVPTYASAGEVVSRDLRWCAEQLNKNVRAHDDAMVRRFVEDWERNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGKPMAVRSGRANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMLYATRQS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1406 480 Gene3D - 219 471 IPR023213 -
Apr9g1406 480 Pfam Transferase family 7 473 - -
Apr9g1406 480 SUPERFAMILY CoA-dependent acyltransferases 35 181 - -
Apr9g1406 480 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 474 - -
Apr9g1406 480 Gene3D - 6 203 IPR023213 -
Apr9g1406 480 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1406 Apr-Chr9 23671620 23673581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1406 5 467 Monolignol Biosynthesis Gene Families AT5G48930 26.371 3.15e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1406 - - gmx:100779616 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1406 9 23671620 23673581 Apr10g2093 10 33650594 33651997 ECH
Apr9g1406 9 23671620 23673581 Apr9g1406 9 23671620 23673581 ECH
Apr9g1406 9 23671620 23673581 Apr10g2093 10 33650594 33651997 PCT