LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g1378	ATGGGGGAGCATCCTAAGGGCGTTGGATCCGCAGAGTTGCTTCACACAAGTATGGTTCAAAGTGTCCTCGGCAGCAAATTTGCACCAGACGTTTTGCTGCATAGCTACAAGAGTTTTAATGGATTTGTTGCGAGGCTAACAAAAGAGGAAACAATGAAAATGAGAGAAATAGATGGTGTGGTATCTATTATACCAAATAGAAACAGTAAGCCTCAAACATCAAGGTCTTGGGATTTCCTAGGCTTCCCCGAACAAGTCAGAAGAATCGTTACAGAAAGTAACATGGTCGTTGGAGTAATTGATAGTGGAATTTGGCCTGAGTCTGAGAGCTTTAATGACAAAGGATTTGGTCCACCACCACCGAAATGGAAGGGAACATGCCATAACTTTACTTGCAATAACAAAATAGTTGGAGCAAAATACTTTAAGATTAATGGAGGGTTTGGAAAAGATGACATCATATCTCCAAGAGATTCAGATGGTCATGGGACTCATTGTGCATCTGTCGCTGCTGGAAACTCAGTTAGGTTTGCAAGTTTATTTGGGCTTGGCTCAGGGACAGCTAGAGGAGGAGTTCCATTAGCACGTATTGCTGTATATAAAGTGTGTTGGTCAGATATATGTCAAGATATTGATGTGCTTGCAGCATTTGATGAAGCCATTAGAGATGGTGTTGACATACTTTCTGTGTCATTAGGACCTACAGAGGTGATACACCCTAACTATTTTGAGGACGTATTTGCAATAGGAGCTTTCCATGCAATGAAGAATGGGATATTGACATCTAAAACTGCCGATAATTTGGGCCCAAATCCCTACTCGATGTCAAATACTGCACCTTGGTTCCTTTCTGTAGCTGCTAGCACTATAGATAGAAAGTTTTTTTACCAATGTTCAGTTGGGCAATGGCAAGATCTATCAGGTAAAATTCATTACAGAAATGATGCATGGATACGTAATATTCTGTAA	969	0.4066	MGEHPKGVGSAELLHTSMVQSVLGSKFAPDVLLHSYKSFNGFVARLTKEETMKMREIDGVVSIIPNRNSKPQTSRSWDFLGFPEQVRRIVTESNMVVGVIDSGIWPESESFNDKGFGPPPPKWKGTCHNFTCNNKIVGAKYFKINGGFGKDDIISPRDSDGHGTHCASVAAGNSVRFASLFGLGSGTARGGVPLARIAVYKVCWSDICQDIDVLAAFDEAIRDGVDILSVSLGPTEVIHPNYFEDVFAIGAFHAMKNGILTSKTADNLGPNPYSMSNTAPWFLSVAASTIDRKFFYQCSVGQWQDLSGKIHYRNDAWIRNIL*	323

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g1378	322	ProSiteProfiles	Serine proteases, subtilase domain profile.	76	322	-	-
	Apr9g1378	322	SUPERFAMILY	Subtilisin-like	72	307	IPR036852	GO:0004252\|GO:0006508
	Apr9g1378	322	Gene3D	-	291	310	-	-
	Apr9g1378	322	Gene3D	Peptidase S8/S53 domain	94	290	IPR036852	GO:0004252\|GO:0006508
	Apr9g1378	322	PANTHER	PUTATIVE-RELATED	1	302	-	-
	Apr9g1378	322	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	1	302	IPR045051	-
	Apr9g1378	322	PRINTS	Subtilisin serine protease family (S8) signature	92	111	IPR015500	-
	Apr9g1378	322	PRINTS	Subtilisin serine protease family (S8) signature	158	171	IPR015500	-
	Apr9g1378	322	CDD	Peptidases_S8_3	70	290	IPR034197	-
	Apr9g1378	322	Pfam	Subtilase family	93	289	IPR000209	GO:0006508\|GO:0008236

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g1378	Apr-Chr9	23410106	23411935	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g1378	15	309	Subtilisin-like Serine Gene Family	AT5G58840	51.987	7.82e-98	297

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g1378	-		-	aprc:113874478	659.833

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