Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1376 ATGGCAATCAAAATAAGTGCACTCCTTGCAACAGGGCTTATCATCGTAAGCCTTGTCTCGGTTGCATCTGCTACTGCCGGAACTGCCACTTATTACGATGTTTACGTTCCATCTGCATGCTATGGATACCAAGATCAGGGGACGATGATAGCTGCTGCAGGAGACTCAATATGGGCTAATGGAGCAGCATGTGGTAAAATGTATAGTATAAAATGCACAGGTGCCACTAACCAAGGTGTGCCTCAGCCATGTAAGGGTGGGAGTGTTACGGTCAAGATTGTGGATCGTTGCCCTTCCCCCGGTTGCCAAGCAACCATTGATCTCTCTAAACAAGCTTTCTCTCAGATCGCTGACCTCAATGCTGGAAAAATTAAAATTGATTACAACAGGGTGTGA 396 0.4621 MAIKISALLATGLIIVSLVSVASATAGTATYYDVYVPSACYGYQDQGTMIAAAGDSIWANGAACGKMYSIKCTGATNQGVPQPCKGGSVTVKIVDRCPSPGCQATIDLSKQAFSQIADLNAGKIKIDYNRV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1376 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 131 IPR044206 GO:0009627|GO:0048046
Apr9g1376 131 SUPERFAMILY Barwin-like endoglucanases 13 131 IPR036908 -
Apr9g1376 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Apr9g1376 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Apr9g1376 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 4 131 - -
Apr9g1376 131 Gene3D - 23 131 IPR036908 -
Apr9g1376 131 SMART dpbb_1 50 128 IPR007112 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1376 49 130 Expansin Gene Family AT2G45110 34.409 1.25e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1376 - - vra:106764512 204.527