Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1362 ATGAAGGCACTTATTCTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCACTGACACTCAGTGTCCCTAAGCCTCTTGTTGATTTTGCTAACAAACCCATGATTCTGCATCAGATAGAGGCCCTTAAGGCCATTGGAGTTACTGAAGTGGTGCTAGCCATCAATTACCAACCGGAGGTTATGTTGAATTTTTTGAAGGATTTTGAAGCAAAGCTTGGCATCAAGATCACATGCTCTCAAGAAACTGAACCACTGGGAACTGCAGGCCCTTTGGCTCTTGCCAGGGATAAGCTTATAGATAGCTCTAGAGAGCCATTTTTTGTTCTCAACAGCGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCATAAAGCCCATGGAGGGGAGGCTTCCATAATGGTAACAAAGGTTGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAAGAGACCACAGGGCAGGTTGATAAGTTTGTTGAAAAACCGAAGTTGTTTGTTGGAAACAAGATCAATGCCGGAATTTACCTGTTGAACCCGTCTGTTTTGGATAGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCTGCTGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCGAGGGACTATATTACTGGCCTGAGACTTTACCTGGACTCATTGAGGAAGAAGTCTTCTTCTAAGTTGGCCAGTGGCTCTTCCATTGTAGGGAATGTCATTGTCGATGAGACAGCCAAAATTGGTGAGGGATGTCTAATTGGGCCTGATGTTGCTATTGGTCCTGGCTGCATAATTGAGCCAGGTGTTCGGCTATCACGCTGCACAGTAATGCGAGGAGTAAGGATTAAGAAGCACGCGTGCATATCCAGCAGTATTATTGGGTGGCATTCTACCGTTGGGCAATGGGCTCGAGTGGAGAATATGACTATCCTTGGAGAAGATGTTCATGTATGTGACGAAATTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATCAAGTCAAGTATTCTGAAGCCAGAAATTGTCATGTGA 1086 0.4466 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVTEVVLAINYQPEVMLNFLKDFEAKLGIKITCSQETEPLGTAGPLALARDKLIDSSREPFFVLNSDVISEYPLKEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEETTGQVDKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSSSKLASGSSIVGNVIVDETAKIGEGCLIGPDVAIGPGCIIEPGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1362 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Apr9g1362 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Apr9g1362 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Apr9g1362 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Apr9g1362 361 Gene3D Hexapeptide repeat proteins 235 356 - -
Apr9g1362 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Apr9g1362 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
Apr9g1362 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1362 Apr-Chr9 23261297 23264571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1362 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 22.798 5.10e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1362 9 23261297 23264571 Apr9g1362 9 23261297 23264571 ECH
Apr10g2059 10 33371506 33376132 Apr9g1362 9 23261297 23264571 PCT