Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1358 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGACGGAGAGACTCCCACTCCGATCGAGGTCACTTCGCGGCCTTCCGCTCGTCGGAGTTTAGACTTGCTTCCCTTGAAATTCATAGCTGACGTGGCGATCCCGCCGCCCGATAGTAGCCGGAAGCGCCAGAAGCTGGATCCGTGCACCTCTCTGGCGCCTCCCCGAGAGTGCGAAAACGCGGTTGAGAATTGCGAACAAAAGGGAGTTGAAGTTGCGTCGCTTCCGAATTGTTCGATGAATTCTTTGTTGCACTCGAGGGTTGTTGAAGAGCGTCCGAGGTATGGGGTAACGTCGGTTTGTGGGCGGAGGAGGGACATGGAAGACGCTGTTTCGATTCGTCCATGGTTCTGTCAAGAAAACGGTTCTCAGGATAAAAACGGGTTCCATTTCTTTGGCGTTTTCGACGGTCATGGATGCTCACACGTGGCGACCATGTGCAAGGAGAGGCTACACGAGATTGTGAAGGAAGAGGTTGGAAAAACCAAAGAGAATTTGGAATGGGAATCAACGATGAAGAAGTGTTTCGCTCGCATGGATGAGGAGGTGTTAAGTTGGAGCCATAGCAGCCAGACCCCATCTTGCAGGTGCGAGCTCCAAACTCCCCATTGCGACGCCGTCGGATCCACCGCCGTCGTCGCCGTCGTCACGCCGGAAAAGATAATCGTAGCTAACTGTGGCGACTCACGCGCCGTTCTTTGCCGGAACAGCGTAGCCATCCCACTCTCCAACGATCATAAGCCTGACCGACCCGACGAGTTGGTTCGGATCCAAAACGCGGGAGGGCGCGTGATCTACTGGGATGGTCCTAGAGTGCTTGGGGTGTTGGCCATGTCCAGAGCCATAGGGGACAATTATTTGAAGCCGTATGTTATTTCGGAACCGGAGGTAACCGTAACAGAACGGAGTGACGACGATGAGTGTTTGATTCTAGGCAGTGATGGGCTGTGGGACACGGTCCAAAACGACACCGCATGCAAGGTGGTGAGGATGTGTCTTAAAGCGCAGAAACTGGCGTCGCCGCCGGGGTCTCCGGGTAGAAACGTGGCGGTGGATTGCTCCGACAAGGCGTGCTCCGACGCGTCCATTTTGCTGACCAAGTTGGCGCTGGTGAGGCAAAGTACGGACAATGTGAGCGCGGTGGTCGTTGATTTGAGGAGAGATCAACAACAAAAGGAAAGGAATTAA 1215 0.544 MAGICCGVVGDGETPTPIEVTSRPSARRSLDLLPLKFIADVAIPPPDSSRKRQKLDPCTSLAPPRECENAVENCEQKGVEVASLPNCSMNSLLHSRVVEERPRYGVTSVCGRRRDMEDAVSIRPWFCQENGSQDKNGFHFFGVFDGHGCSHVATMCKERLHEIVKEEVGKTKENLEWESTMKKCFARMDEEVLSWSHSSQTPSCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNSVAIPLSNDHKPDRPDELVRIQNAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDDDECLILGSDGLWDTVQNDTACKVVRMCLKAQKLASPPGSPGRNVAVDCSDKACSDASILLTKLALVRQSTDNVSAVVVDLRRDQQQKERN* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1358 404 Pfam Protein phosphatase 2C 103 366 IPR001932 -
Apr9g1358 404 SMART PP2C_4 92 392 IPR001932 -
Apr9g1358 404 ProSitePatterns PPM-type phosphatase domain signature. 140 148 IPR000222 GO:0043169
Apr9g1358 404 SUPERFAMILY PP2C-like 94 395 IPR036457 -
Apr9g1358 404 CDD PP2Cc 103 394 IPR001932 -
Apr9g1358 404 ProSiteProfiles PPM-type phosphatase domain profile. 103 394 IPR001932 -
Apr9g1358 404 Gene3D - 98 403 IPR036457 -
Apr9g1358 404 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 23 399 - -
Apr9g1358 404 PANTHER ALPHABET, ISOFORM E-RELATED 23 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1358 Apr-Chr9 23208907 23210821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1358 1 401 PP2C-type Phosphatase Gene Family AT3G11410 58.596 2.34e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1358 K14497 - gmx:100781388 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1358 9 23208907 23210821 Apr10g2051 10 33314445 33316629 ECH
Apr9g1358 9 23208907 23210821 Apr9g1358 9 23208907 23210821 ECH
Apr10g2051 10 33314445 33316629 Apr9g1358 9 23208907 23210821 PCT