Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1355 ATGGCGAATCGTTGGTGGGCCGGGAACGTGGCCGTGAGGCCCCACGGGCCCAACTCTTCTTCTCCTCCTCCGTCGCTTCAGCTTAGGGATGCAAGAGACCAAGACAGCGACAACAACAACGTTGTTGCTACGCCGACCAACAGTGGAAACAGCAACAACACCAACGTTAACGCTGTGGAGGAGGAAGAGAACAACCACCACAACGAGCGTGAGGGTGAGGACCAGAACCTCGGAAGCGGTCGGAGGCCACGTGGGAGGCCACGTGGGTCGAAGAACAAGCCGAAGCCGCCGGTAGTGATAACGAAGGAGAGTCCCAACGCGCTTCGCAGCCACATCTTGGAGATCAGCGGCGGAAGCGACGTGGCGGAGTGCATTGCTGCCTTCGCCAACCGACGCCACCGCGGCGTCTCCGTGCTGAGCGGTAGCGGCGTTGTCACCAACGTCACGCTCCGGCAGCCGGCGACCCCCGGCGGGGTGGTCACGCTTCAGGGGAGGTTCGAGATTTTGTCGCTCTCTGGAGCGTTTTTGCCGGCTCCGTCACCACCGGAGGCCACCGGACTGACCGTGTATTTGGCCGGCGGTCAGGGGCAGGTAGTCGGCGGCACGGTGGCGGGGCCATTGGTGGCTTCTGGGCCTGTTATGGTAATTGCTGCAACTTTTGCTAATGCTACTTATGAGAGGTTACCGTTGGAAGATGAACATGGTGAGGAAGATATGCAAGAGGTAAATGAAAGTGGTGGTGCTTCAACTCCTCCTTCTCAGGGTGAACAACAACAGGTTTCAATGCCTGTGTATAATTTGAATCCCAATTTGATGCCAAATGGTGAAGGTTTTTGGGGCTCTTCACCTCGCCCTCTTCCTCCCCCTTATTGA 873 0.5796 MANRWWAGNVAVRPHGPNSSSPPPSLQLRDARDQDSDNNNVVATPTNSGNSNNTNVNAVEEEENNHHNEREGEDQNLGSGRRPRGRPRGSKNKPKPPVVITKESPNALRSHILEISGGSDVAECIAAFANRRHRGVSVLSGSGVVTNVTLRQPATPGGVVTLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGTVAGPLVASGPVMVIAATFANATYERLPLEDEHGEEDMQEVNESGGASTPPSQGEQQQVSMPVYNLNPNLMPNGEGFWGSSPRPLPPPY* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1355 290 MobiDBLite consensus disorder prediction 60 81 - -
Apr9g1355 290 MobiDBLite consensus disorder prediction 234 290 - -
Apr9g1355 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 33 285 - -
Apr9g1355 290 ProSiteProfiles PPC domain profile profile. 105 242 IPR005175 -
Apr9g1355 290 MobiDBLite consensus disorder prediction 1 101 - -
Apr9g1355 290 CDD DUF296 109 220 IPR005175 -
Apr9g1355 290 Gene3D - 108 241 - -
Apr9g1355 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 285 IPR014476 GO:0003680
Apr9g1355 290 MobiDBLite consensus disorder prediction 37 59 - -
Apr9g1355 290 MobiDBLite consensus disorder prediction 243 268 - -
Apr9g1355 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 221 IPR005175 -
Apr9g1355 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1355 Apr-Chr9 23165294 23166166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1355 81 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.734 4.76e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1355 - - aprc:113874473 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1355 9 23165294 23166166 Apr9g1355 9 23165294 23166166 ECH