Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1350 ATGGCTTCAAACTCCCACACCAATAACAAAGAAAAATCTTCTTCTTGGACACGCATTCAGAACAAGCAATTCGAAAGAGCACTTGCTTTGTATGACAAAGACACACCAGATCGATGGAAAAACATAGCCAAAGTAGTTGGTGATAAATCAGCTGAAGAAGTGAAGAGACACTATGAAATCCTTTTGGAGGACCTTAAGCATATAGAATCTGGACATGTTCCAATTCCCAGCTATAATTCCACACATAATAATGATTCATGGACAAAAGAGGCCTCTCAAATACCTTAA 288 0.3819 MASNSHTNNKEKSSSWTRIQNKQFERALALYDKDTPDRWKNIAKVVGDKSAEEVKRHYEILLEDLKHIESGHVPIPSYNSTHNNDSWTKEASQIP* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1350 95 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Apr9g1350 95 MobiDBLite consensus disorder prediction 74 95 - -
Apr9g1350 95 CDD SANT 15 62 IPR001005 -
Apr9g1350 95 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Apr9g1350 95 Gene3D - 7 75 - -
Apr9g1350 95 SUPERFAMILY Homeodomain-like 15 69 IPR009057 -
Apr9g1350 95 SMART sant 12 64 IPR001005 -
Apr9g1350 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Apr9g1350 95 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Apr9g1350 95 MobiDBLite consensus disorder prediction 73 95 - -
Apr9g1350 95 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1350 Apr-Chr9 23130800 23132829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr9g1350 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1350 - - gmx:100788168 156.377