Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1337 ATGGCAATTGGGTTCATGGAGGTGCAGCTTGTGAAAGCAAAAGGCCTGCGCAACACTGACATCTTTGGTAAAATGGACCCCTACGTTCTCATACAATACAAAGGCCAAGAGCGAAAGAGTAGTGTCGCTAATGGCCAAGGCAAAAATCCAGTATGGAATGAGAAATTTATCTTCAGAGTAGAATATCCTGGATCAGGAGATCGAAACAAGCTTATCCTTAAAATTATGGACAAAGACAGTTTTTCTGCAGATGATTTTGTTGGACAAGCCACAATCTATGTAGGGGATTTATTAGCCCAAGGGGTAGAGAATGGAGGAGCTAAGCTACAAACTCTTAAGTATAGAGTGGTTCGTGCAAACCAGTCTTATTGTGGCGAAATTGATGTTGGTATCACTTTCACCCGAAAGGTAGAAGACGAATTTATTAAAGAAGACATGGGAGGATGGAAAGAAAGTGATTACTATCTGTCATAG 474 0.4093 MAIGFMEVQLVKAKGLRNTDIFGKMDPYVLIQYKGQERKSSVANGQGKNPVWNEKFIFRVEYPGSGDRNKLILKIMDKDSFSADDFVGQATIYVGDLLAQGVENGGAKLQTLKYRVVRANQSYCGEIDVGITFTRKVEDEFIKEDMGGWKESDYYLS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1337 157 Pfam C2 domain 6 104 IPR000008 -
Apr9g1337 157 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
Apr9g1337 157 Gene3D C2 domain 2 135 IPR035892 -
Apr9g1337 157 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Apr9g1337 157 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Apr9g1337 157 PANTHER C2 DOMAIN-CONTAINING 1 153 - -
Apr9g1337 157 SMART C2_3c 5 106 IPR000008 -
Apr9g1337 157 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1337 Apr-Chr9 22980326 22981732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1337 3 109 C2H2 Transcription Factor Family AT4G21160 29.907 7.20e-11 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1337 9 22980326 22981732 Apr9g1337 9 22980326 22981732 ECH