Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1326 ATGGCCAACATAGCTGAAGGCATCCAAGAAGAAGAAATGTCAAGTATGGAAGAGGGTGTTAACCCCATCCCTTCCATAACCTTGGGCATGCATAGTTGTTGTTCATCAAACCATGTTGCAACCCTGGCACAAAAGGCGATTGCAGAATTCATTGGCACATATATGGTGGTATTTGCTGGTTGTGGTTCTGTGGCAGTGAATAAGATCTATGGTTCTGTCACATTTCCAGGCATTTGTGTCACATGGGGACTGATTGTAATGGTAATGATTTATTCTGTTGCTCATATTTCTGGAGCTCACTTCAATCCTGCAGTCACCATCACTTGGGCCATCTTTCGCCGCTTCCCATTTAAAGAAGTGCCACTTTATATTTTTTCTCAGTTGATGGGATCTGTACTTGCTAGTGGAACATTAGCCATAATGTTTAATGTCACACCCAATGCTTATTTTGGAACGGTACCAGTTGGATCTAATGGCCAGTCTTTAGCTGCTGAAATCATCATCACCTTTCTCTTGATGTTTGTCATATCTGCAGTTTCTACAGATGACCGAGCGGTAGGTGACTTTGGAGGAGTTGCAGTTGGAATGACTATAATGTTGAATGTGTTTATTGCAGGGCCTGTGTCAGGAGCTTCCATGAACCCTGCAAGAAGTCTTGGTCCGGCACTTGTCAAGCATGTTTACAAAGGGTTATGGGTATACATAGTTGGTCCAATTGTTGGAGCCATAACTGGAGCATTTGTCTATAACTTTCTCAGATCCACAGGCAAGCCACTTTCAGAATAA 786 0.4288 MANIAEGIQEEEMSSMEEGVNPIPSITLGMHSCCSSNHVATLAQKAIAEFIGTYMVVFAGCGSVAVNKIYGSVTFPGICVTWGLIVMVMIYSVAHISGAHFNPAVTITWAIFRRFPFKEVPLYIFSQLMGSVLASGTLAIMFNVTPNAYFGTVPVGSNGQSLAAEIIITFLLMFVISAVSTDDRAVGDFGGVAVGMTIMLNVFIAGPVSGASMNPARSLGPALVKHVYKGLWVYIVGPIVGAITGAFVYNFLRSTGKPLSE* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1326 261 Pfam Major intrinsic protein 41 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PANTHER AQUAPORIN NIP2-1 30 261 IPR034294 -
Apr9g1326 261 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PRINTS Major intrinsic protein family signature 195 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PRINTS Major intrinsic protein family signature 232 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 PANTHER AQUAPORIN NIP4-1-RELATED 30 261 - -
Apr9g1326 261 TIGRFAM MIP: MIP family channel proteins 48 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 Gene3D Glycerol uptake facilitator protein. 11 258 IPR023271 -
Apr9g1326 261 SUPERFAMILY Aquaporin-like 40 257 IPR023271 -
Apr9g1326 261 CDD MIP 44 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr9g1326 261 ProSitePatterns MIP family signature. 100 108 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1326 Apr-Chr9 22897324 22899040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1326 1 261 Major Intrinsic Protein MIP AT5G37820 64.639 5.99e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1326 K09874 - gmx:100791338 414.846