Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1321 ATGATGGATTTCTGTTTCTCCCAAGGAAACTGTACTGACACCAATGAGGCTTCCAATGCACACGTTTCCTCTTTAGTTGTAAATGACTTTTCTGACCATAAAAGGCTCAAATTCAGAACCTTTTTGAGAAAAGTGATCTGGGACTTTACCTATGCATTTGTTGCTGTTCCTTGTGGTGGCAATAACGACCTTAACGGTATAAAAAATACAACTTTGGAGCACAACAACAAGGCGTGGTTGCTGGCTGAGTCTGGAGCAGAATTGGCAAGTGCTGACCCTCAATCTGTTCACTCATCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGTTCTTCTTCTTCTGCTGCAACCGTTTTGATGGTGAATTTGGAATATGAATCTCAAGCCAGGGAGATGAAATGGAGGAGGATAAAGTCACTGGAGAGAAACATATCTCCTGTGGTCAACACGTTGATCAGGTTCAACTATGGTGAAATTCTATCAGCCACTCGCAATTTCTCCGAAGGGAGAGTATTGGGGAGAGGTGCCTTGAGCTGTGTTTTCAGAGGAAGAGTTGGGCTTTTAAGGACCGCTGTTGCGATTAAAAGGTTGGATAAGGAAGACAAGGAGTGCGCCAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCATAACCCAAACATTGTTCCCCTTGTGGGATTTTGTATTGACTCAGAACAGGGTTTGTTTTTGGTGTACAAGTATGTATCAGGGGGCAACTTAGAGCATCACTTGCACGGGAGGAAGAAGAGTGTGAGGGGTAGTTCACCACTTCCATGGTCTGTGAGGTATAAAGTTTCAATTGGGATTGCAGAAGCTGTGGCTTATCTCCATTATGGAACTGAAAGATGTGTTGTCCATAGAGACATTAAGCCTTCAAACATTCTGCTTTCCTCTAAGAAAATTCCCAAGTTATGTGATTTTGGATTAGCAACATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGTTACTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGGAAGCCAATTGAAGCAAAAAGGCCTCCAGGAGAGGAAAACTTGGTTTTATGGGCTAAACCTTTGCTTAAAAAAGGTAAAGGAGCAATTGAAGAGTTGCTTGATCCTCAAGTCAAGTACAAGTTAAGATACTCAAAGCAAATGGCTCGAATGGTTGATGCAGCTGCTGCTTGTGTTACAAGTGAAGAATCTAGGAGACCTAGCATGCATGAGATTCTTGCAATACTGAAAGGTGAAATAGAGCCTGTTTTATCTAAAAGAAGGAAGTCTGGTTATCTTGGGAATGGATGTTTGATTGATTATTACCCTCAATTACAACAAACAAATAATGAGATGGATAGTTTCTTGGCTTTGGCAATGCTAGGAGTTCCTGAGTATGAGTATGAGGATGGTGATTATCTTTATGGCCATTAA 1542 0.415 MMDFCFSQGNCTDTNEASNAHVSSLVVNDFSDHKRLKFRTFLRKVIWDFTYAFVAVPCGGNNDLNGIKNTTLEHNNKAWLLAESGAELASADPQSVHSSFRFSFCSQVEVESFNMSSSSSAATVLMVNLEYESQAREMKWRRIKSLERNISPVVNTLIRFNYGEILSATRNFSEGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKECAKAFCRELMIASSLHNPNIVPLVGFCIDSEQGLFLVYKYVSGGNLEHHLHGRKKSVRGSSPLPWSVRYKVSIGIAEAVAYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRPPGEENLVLWAKPLLKKGKGAIEELLDPQVKYKLRYSKQMARMVDAAAACVTSEESRRPSMHEILAILKGEIEPVLSKRRKSGYLGNGCLIDYYPQLQQTNNEMDSFLALAMLGVPEYEYEDGDYLYGH* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1321 513 Gene3D Transferase(Phosphotransferase) domain 1 250 465 - -
Apr9g1321 513 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 7 509 - -
Apr9g1321 513 Gene3D Phosphorylase Kinase; domain 1 157 249 - -
Apr9g1321 513 SUPERFAMILY Protein kinase-like (PK-like) 155 457 IPR011009 -
Apr9g1321 513 ProSiteProfiles Protein kinase domain profile. 172 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1321 513 PANTHER OS01G0750732 PROTEIN 7 509 - -
Apr9g1321 513 Pfam Protein kinase domain 173 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1321 513 SMART serkin_6 172 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1321 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1321 Apr-Chr9 22856015 22859546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1321 160 455 Trihelix Transcription Factor Family AT1G70460 41.472 7.31e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr9g1321 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1321 - - gmx:100802176 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2009 10 32974119 32977123 Apr9g1321 9 22856015 22859546 PCT