Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1304 ATGGGAAGACAACCTTGTTGTGACAAAGTTGGGTTGAAGAAGGGGCCATGGACTGCAGAGGAGGATAAGAAGCTCATCACTTTCATCCTCACTAATGGTCAATGTTGTTGGAGAGCTGTTCCAAAACTAGCAGGACTATTAAGGTGTGGGAAGAGTTGCAGGCTCAGGTGGACCAATTATCTGAGGCCAGACTTAAAGAGAGGCCTGTTATCAGAATATGAAGAGAAAATGGTCATTGATCTTCATGCTCAACTTGGCAATAGATGGTCTAAGATTGCTTCTCATCTCCCTGGAAGAACTGATAATGAGATAAAAAACCATTGGAATACCCACATAAAGAAAAAATTGAAGAAAATGGGCATTGATCCTGTCACTCACAAGCCCCTCTCTAATGCAACTGAACAAATTCAAAATCAACCAAAACAACTACACCAACCAGAAGAACAGCAGGACCAACAACCTTTGCAAGTTGACTTTGACCCCAAATTTGAACAGAATAAGGAGACAGAGAAGCCAGAGACTTCATTGGATTCATCAACCATCACTGAAGCCAAAGAGGAAGACAAAATTATGACACCCCAGTTTGACACAACGGATCTGATGGATGGGTTTTGCACAGATGAAGTTCCAATTATAGAACTTGATGAGATTCTAGTGCCTTGTGCTCCTTCCTCTTCATCTTCCTCTACCTCCTCTTCAAATTCAACCAACTTCCTTGAAGACCTACAATTCCCGGATTTTGAATGGTCTTGTAATTACAATGATAATAATAGTATTAACAATAACAACAATGAAAACAACATCATCATCAACAACAACAGCACTATGGCCTTGTGGGATGATGACTTTATTAGCACTCTAGATTTTCTGATTAATGATGATGATGATGCTGATAGAAAGCAAGTATTTGATGCTCCTCTCACTCAGTACTCAAGAATGGTCATGGATTCAGAATCTTGGGCATATGAGTTGTTTTGA 978 0.3998 MGRQPCCDKVGLKKGPWTAEEDKKLITFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSNATEQIQNQPKQLHQPEEQQDQQPLQVDFDPKFEQNKETEKPETSLDSSTITEAKEEDKIMTPQFDTTDLMDGFCTDEVPIIELDEILVPCAPSSSSSSTSSSNSTNFLEDLQFPDFEWSCNYNDNNSINNNNNENNIIINNNSTMALWDDDFISTLDFLINDDDDADRKQVFDAPLTQYSRMVMDSESWAYELF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1304 325 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 298 - -
Apr9g1304 325 PANTHER MYB TRANSCRIPTION FACTOR 1 298 - -
Apr9g1304 325 CDD SANT 16 61 IPR001005 -
Apr9g1304 325 Gene3D - 11 67 - -
Apr9g1304 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Apr9g1304 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Apr9g1304 325 MobiDBLite consensus disorder prediction 133 153 - -
Apr9g1304 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Apr9g1304 325 CDD SANT 74 112 IPR001005 -
Apr9g1304 325 SMART sant 13 63 IPR001005 -
Apr9g1304 325 SMART sant 66 114 IPR001005 -
Apr9g1304 325 MobiDBLite consensus disorder prediction 165 188 - -
Apr9g1304 325 Gene3D - 70 154 - -
Apr9g1304 325 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Apr9g1304 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Apr9g1304 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Apr9g1304 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1304 Apr-Chr9 22681618 22683889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1304 1 297 MYB Transcription Factor Family AT1G66230 58.086 2.89e-105 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr9g1304 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1304 K09422 - gmx:100792103 498.049