Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1302 ATGAAGTCCGAGCGGGTCAAAGAAGCGCTTCTGCTTACTCTCACATCGTGCCTCTTCGTCATTGCAGGTTCGGATCTAGCTTCGGACAGAGCGAGCCTGTTATTGCTCCGAAGCAGGGTGGGGGGTCGAACCTTGCTTTGGAACACGACCCAAACAAGCCCTTGTTCATGGACCGGCGTGCTCTGCAACAACGGAAGAGTAACGGTTTTGCGTCTCCCCGCTATGGGTCTTACCGGTTCGCTCCCGACCGGTTTAGGGAACCTGACGGAACTGCAGACACTTTCTCTCCGATTCAACGCACTAACTGGAGGAATTCCCTCGGATTTCGCGAACTTAAAATCCTTACGTAACTTGTATTTACAGGGAAACTTTTTCTCCGGTGAGGTTCCCGATTCGGTGTTCGCTTTGCAGAACTTGGTGAGGTTGAATTTGGGTTCCAACAATTTCAGTGGAGAGGTTTCAACCAAGTTCAATAGTCTCACTCGTTTGGCCACTCTCTATTTGCAACGCAACGGGTTCACCGGCTCTGTCCCTGACCTTAGTGTTCCTCCTCTTCAGCAGTTCAATGTGTCTTTTAACCGGTTAACCGGGTCAATTCCCGAGAGGTTTTCGCGTTTGGACCAAAGCGCTTTTGTTGGAAACTCGCTTTGTGGGAAGCCCTTGCAACCTTGTCCCGGAAGTGGGAAGAAAGATAATAACTTGTCTGGGGGAGCCATTGCGGGTATTGTGATTGGTTGTGTGTTGGGTGTGTTGTTGATTCTGGTTCTTTTGTTGTTCCTGTGTAGAAAAAGGAGTAGGAAAAGCGATTCTTCCATGCAAACTAAGCGGGTTGTTGAGAGTGAGGTGTCACGTGAGAAGAGTCGTGGAGATCGTGGTGGTGGTAGTGGTGGTGGAAATGGTGGTAATTCAGCTTCAGCAGTAGCAGGGTCGGTGGAGAAGAGCGAGGTTAAGGGTGGTGGAGATAAGAGTTTGGTGTTTTTTGGGAATGTTAATAGAGTGTTTAGTTTGGATGAATTGTTGAGAGCTTCAGCAGAAGTGTTAGGGAAAGGGACTTTTGGAACAACTTACAAAGCCACTCTGGAGATGGGAACGAGTGTGGCTGTGAAGAGGTTGAAGGATGTTACTGCAACAGAGAGGGAATTCAGGGAGAAAATTGAGCAAGTGGGGAAGCTGGTTCATCAAAACTTGGTCCCACTAAGGGGTTATTATTTTAGCAGGGATGAAAAGCTCATTGTGTATGATTACATGCCCATGGGAAGTTTATCTGCTTTATTACATGCAAATGGTGGAGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCGATTGTCCTTGGAGCTGCCCGCGGGATTGCATACCTTCATTCACATGGCCCAACAAGCTCCCATGGAAACATCAAGTCATCAAACATCCTTCTCACAAAATCTTTTGAAGCTCGTGTCTCTGACTTTGGCCTTGCTTATCTTGCTCTTCCAACCTCTACACCAAACCGCGTTTCTGGTTACCGTGCCCCAGAGGTCACTGATGCGCGCAAAGTATCCCAAAAAGCTGATGTCTATAGCTTTGGTATCATGCTTTTGGAACTGCTTACAGGAAAGGCTCCTACTCATTCTTCACTGAATGAAGAAGGGGTAGACCTCCCAAGATGGGTCCAATCTGTGGTTCAAGATGAGTGGAACACTGAAGTATTTGACATGGAGCTTCTTAGGTACCAGAATGTTGAGGAGGAAATGGTCAAGCTCTTGCAGCTTGCCCTTGAATGTACTGCCCAATATCCTGACCAAAGACCTTCAATGGATGTGGTGGCAGGCAAGATTGAGGAAATTTGTCATCCTAGTGTAGTGATAGAGGAAGGGAAGAATAATGATTTTAAAGATGCAGATATGGGATTTTCCCAACAGTACTACTCTGTTGATTCTGGTGCATCACATGCTTGA 1941 0.473 MKSERVKEALLLTLTSCLFVIAGSDLASDRASLLLLRSRVGGRTLLWNTTQTSPCSWTGVLCNNGRVTVLRLPAMGLTGSLPTGLGNLTELQTLSLRFNALTGGIPSDFANLKSLRNLYLQGNFFSGEVPDSVFALQNLVRLNLGSNNFSGEVSTKFNSLTRLATLYLQRNGFTGSVPDLSVPPLQQFNVSFNRLTGSIPERFSRLDQSAFVGNSLCGKPLQPCPGSGKKDNNLSGGAIAGIVIGCVLGVLLILVLLLFLCRKRSRKSDSSMQTKRVVESEVSREKSRGDRGGGSGGGNGGNSASAVAGSVEKSEVKGGGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGTSVAVKRLKDVTATEREFREKIEQVGKLVHQNLVPLRGYYFSRDEKLIVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIVLGAARGIAYLHSHGPTSSHGNIKSSNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEVTDARKVSQKADVYSFGIMLLELLTGKAPTHSSLNEEGVDLPRWVQSVVQDEWNTEVFDMELLRYQNVEEEMVKLLQLALECTAQYPDQRPSMDVVAGKIEEICHPSVVIEEGKNNDFKDADMGFSQQYYSVDSGASHA* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1302 646 Pfam Protein kinase domain 344 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1302 646 PANTHER INACTIVE RECEPTOR KINASE-RELATED 9 620 - -
Apr9g1302 646 MobiDBLite consensus disorder prediction 270 291 - -
Apr9g1302 646 SUPERFAMILY L domain-like 47 208 - -
Apr9g1302 646 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Apr9g1302 646 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Apr9g1302 646 MobiDBLite consensus disorder prediction 270 317 - -
Apr9g1302 646 SUPERFAMILY Protein kinase-like (PK-like) 345 603 IPR011009 -
Apr9g1302 646 Gene3D Ribonuclease Inhibitor 182 228 IPR032675 -
Apr9g1302 646 Gene3D Ribonuclease Inhibitor 133 181 IPR032675 -
Apr9g1302 646 Gene3D Ribonuclease Inhibitor 32 132 IPR032675 -
Apr9g1302 646 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1302 646 Gene3D Transferase(Phosphotransferase) domain 1 416 632 - -
Apr9g1302 646 PANTHER OS05G0588300 PROTEIN 9 620 - -
Apr9g1302 646 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Apr9g1302 646 CDD STKc_IRAK 347 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1302 Apr-Chr9 22658774 22662124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1302 25 610 Receptor kinase-like Gene Family AT1G48480 57.655 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g1302 Pkinase 7.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1302 - - aprc:113846223 1168.3