Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1290 ATGAGTGCTTCTTCGTCCAGAGAAGTGAACAAGGATGAGCAAGTGGCCCAATGCAAAGTCCGCAAGCCAAGGTGGCTTGAGGCTTTTCTGAAAAAAACTTTCTTTGACTCATGTACGGCTCATCCATTTCGTAGGAATGAGTTGAATAAGTACTGTATAAACTGCAATCTGTCAGTTTGCCAATATTGTGTATCATCAGGCCCTCATCGCAACCACAAGATACTTAAAATCTATAGACATGTTTACAAGGATGTTGTCTCCCTTGCTGCTATGGAAAAGTATATTGACACCTCGCAGATCCAGCCCTACAAATGCAACAAGCGACTGGTTATTTCCCTGAATCCTCTCCCACACTGTGGTTCAGCAATAAATACTGAGGCATCATGTGATACCTGCAGTAGAAAGTTGACTGACCCTGATGTATACCGCTACTGCTCCATTTCCTGCAAGGTCAAAGCTTTTTTGTGCAAGCCTAATGATTCAGTTCCTCCCTTCATTTCCCTCCAGAGTCCTCCTCCTCAGGAAAAACAGGAGGACGCTGCTGAACCCCAAAAGGTGCTAAACAAAAGAAAGGGAACACCCCGCAGAGCTCCCTTCTTCTAA 603 0.4478 MSASSSREVNKDEQVAQCKVRKPRWLEAFLKKTFFDSCTAHPFRRNELNKYCINCNLSVCQYCVSSGPHRNHKILKIYRHVYKDVVSLAAMEKYIDTSQIQPYKCNKRLVISLNPLPHCGSAINTEASCDTCSRKLTDPDVYRYCSISCKVKAFLCKPNDSVPPFISLQSPPPQEKQEDAAEPQKVLNKRKGTPRRAPFF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1290 200 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 4 200 - -
Apr9g1290 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 200 - -
Apr9g1290 200 SUPERFAMILY B-box zinc-binding domain 37 79 - -
Apr9g1290 200 Gene3D Classic Zinc Finger 31 107 - -
Apr9g1290 200 ProSiteProfiles Zinc finger B-box type profile. 38 77 IPR000315 GO:0008270
Apr9g1290 200 CDD Bbox2 38 77 - -
Apr9g1290 200 Pfam PLATZ transcription factor 79 151 IPR006734 -
Apr9g1290 200 Pfam B-box zinc finger 37 77 IPR000315 GO:0008270
Apr9g1290 200 MobiDBLite consensus disorder prediction 166 200 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Apr9g1290 PLATZ 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1290 - - tcc:18601328 280.026