Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1286 ATGACATTGGAGGGGATTTTCATTGAGCCCTCTTCAACCACTGCTCCTGATCTCTCTCTTCACATTAGCCCCCCAAGCATCTCCTCTTCCTTGATTTGCAATAACAACAACAGCATCACCCTTTCATCTGTTGAACCTCAAGGTAATTTTAATTTCCCTTCTAGGACTGTGTCTCAAGCCCACACAGAACTCTCTCTGGGAAGGAATTTCACTTCTGGAGGAGCAGAGGAAACACCACACAATCCTTATTATCAAAGCCAAATCCATTTCCATCACCACCTTCACCACAACAACACTACTAGTAACATTAGTACTACAACAACAACCAGTAGTAGTAGTACTACAACTCCCTTGAATCACATAAACTATGGAGTTTCATTGCTTGATGTGTCATCATCAGAAGGGTTGAGGCCAATCAAGGGGATTCCGGTGTATCATAACCGTTCATTCCCTTTTGTGGCCATGGACCATCATGCTAGAGACAAGGATCACCATCACAAGATGTGCTTATATCATCACATGCCTTCTTATCCCTCTCTCTCCTCTTCCTGTTCCCCTCCTTCTTCTTCACCTTCACCTTATGTTGCAGCGAGTATGGATCCCATGTCCCTCTTGAACAATAGGGCAGCTACCACCACCACCACAAGGTTTAATGGGTTTTCTTCTGATGCTTTCAAATCCCATCCATTGCACCAATATGGGGTTGGCACTTCTGAAGCCTCTTCTGGGTTAATGAGATCAAGGTTTTTGCCTAAGCTTCCCAACAAGAGGAGCATGAGAGCACCGAGAATGAGATGGACAAGCACCCTCCATGCTCGATTTGTTCATGCGGTTGAGCTTCTCGGTGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACATTAGCTCATGTCAAGAGTCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGCCATTCAGATGGGTCAGGAGAGGATGACTTGTCTCCGGTGGGGAGCACTGTTGACCGCGGTGGTCTCCGGCAATTCCCCGAACTCAGAGGGCGGCCGGAGCGGCCACCACAACAAGACATGGACTACTCGTCAACCACAACTCTATGGAGCAATTCTTCAAGTTGTAGAGAGCCATGGCTACGAACTAATTCTAACGACATAGATGGTCTCAGATCACCTGTCATTCAGTCACAAACAATAACAGGAGGGCATCAAATTCAGGAGTGTGATTCAACCCAATTCAAGAACATGTCAGGTTCTAATTTGGAGTGCAAGAACCCAAGTTTGGAGTTCACGTTAGGAAGACCAGATTGGAATGGCAAAGAACAAGCCTAA 1356 0.4602 MTLEGIFIEPSSTTAPDLSLHISPPSISSSLICNNNNSITLSSVEPQGNFNFPSRTVSQAHTELSLGRNFTSGGAEETPHNPYYQSQIHFHHHLHHNNTTSNISTTTTTSSSSTTTPLNHINYGVSLLDVSSSEGLRPIKGIPVYHNRSFPFVAMDHHARDKDHHHKMCLYHHMPSYPSLSSSCSPPSSSPSPYVAASMDPMSLLNNRAATTTTTRFNGFSSDAFKSHPLHQYGVGTSEASSGLMRSRFLPKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPVGSTVDRGGLRQFPELRGRPERPPQQDMDYSSTTTLWSNSSSCREPWLRTNSNDIDGLRSPVIQSQTITGGHQIQECDSTQFKNMSGSNLECKNPSLEFTLGRPDWNGKEQA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1286 451 SUPERFAMILY Homeodomain-like 259 315 IPR009057 -
Apr9g1286 451 Gene3D - 261 318 - -
Apr9g1286 451 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 451 IPR044847 GO:0000976|GO:0006355|GO:0010158
Apr9g1286 451 MobiDBLite consensus disorder prediction 319 382 - -
Apr9g1286 451 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 262 315 IPR006447 GO:0003677
Apr9g1286 451 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 451 - -
Apr9g1286 451 MobiDBLite consensus disorder prediction 365 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1286 Apr-Chr9 22517387 22523188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1286 1 448 G2-like Transcription Factor Family AT5G16560 39.545 6.45e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr9g1286 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1286 - - gmx:100812229 571.237