Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1268 ATGGCACCTGTTTCATTGCCTCCCGGTTTCAGGTTCCACCCTACAGATGAAGAACTCGTTGCTTATTACCTCAAAAGAAAGATCAATGGTCGAAAGATTGAGTTGGAGATCATACCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAGTCATTGTTACCGGGGAAAGATTTAGAGTGGTATTTCTTTAGCCCTCGTGATAGAAAGTACCCAAATGGATCAAGAACGAACCGTGCAACCAAATCTGGATATTGGAAGGCCACAGGGAAGGATCGGAAAGTGAATTCCTTGGCTCGATCTGTGGGTATGAAGAAAACCCTAGTTTATTATCGAGGAAGAGCACCCCATGGCTGTCGCACCAATTGGGTCATGCATGAATATCGTCTTGATGAGAGAGAATGTGAAACTGCTTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTCAAGAAGACTACAGTGATTACTCCAAAAGTTGGGGGGCACTATGTTAATGCTACCAGTCATGCCAACCAGATTAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGAAGGGGTGAAGATTTAGACAGCTCAAATTATTTGATGCCGATGGATATTGGCTCACTCCACAACATGAGAAATGATCAAACTGGTTTCAATATTAATGATGAGAGCAGGAATCATGAGAAATTGTCACACTTCTCATCAGAAGACCCATTATTTAGTCTTCCAACTTTTTCATTTGCTAATTATGGAGCTATAACATACCCTCCATCCAAGGTGGATATTGCACTAGAGTGTGCAAGGATGCAGCATAGGTTTGCTATGCCTCCTCTGGAGGTGGAGGACTTCCCTCAAGTTGGAATCTCAGAACTGAAGATGACACAAGGCTCTAGTTCAATGCACGCAAGCACAAATGAAACGGATATCTTGCAAGAGATTCTTTCAGTTGCTCATGCTTCTCAGGAATTGATAAGTCAATCCAACTACTCACAAGAATGGGGTGGCAATGATACTTATGCTCCTCGTGAAGATGATTTTACTTTCATGGTTGGCACTAATTACAATCATATAAACGATATGAGCTCAATGAGATATGTTGACAAAACATGGGGAGATGCAAACCCAAGGTGTATAGAGATTGGAGGAATGGATGAAGAATTTAAGGCAGAGAGGACGGTGGAGAATTTAAGATGGGTTGGAATGTCTAAAAAAGATCTAGAAAAGATGGAAGAACAAAAGATTGTTCCAATTGAGGACATTTCAAACTTCCAAATTAACAGGGAAGAAAATGAGGTGCAAGAATCCGAGCAACACAATAGTAACAAGGAACACAATGATAGTGACATCAACGATTTCTCATTGGACTTCATTAATGATGACGATCCTAATAATGAGAACTTTACAGAAGATGGCAACATGGATGATTATTCCAGTTCTCCTAGTTTTGAGGTCGTTGAGGAAATAAAGGTTAATCATGGAATGTTTGTTTCGACTCGTCAAGTAGCCGAGACATTCTTTCACCAAATAGTTCCTTCACAAACCGTCCAAGTTCACCTCAATCCAGTTATAGCAAACAATCTTTCTATAGAGAATGCAGAGGCAATGATGATGATATTGGAGAACAAAGGGTCTTCTTTCGCAGCAAAATTTAAGGCCTATGTGATGGGGAAGCTAATAAAGCCATCACAGACAATAGCAAGTGCTATTGCTTTTGTCTGTGCACTTATGTTGATGCATTGTGTTTATTTGAAGGAAGAAATGGAAATTTGGAATGATACATGTGGTGGTAGTGCTTGTAACATGAAGAGAATGAGTCAATCATCTGAGATAATCGAATGGAATGAGTCAAAAGAGGTTTGGTTTTTTGGTGTCAAAAGTGAGAAAGGATTTAGTACAGTCTTGAAGAAAATAGGCATTTTCCTCACCATATCTTTGGCTCTTTGTACCATGTGGGCTAACCACATTATAGTTAACCCTTGA 1986 0.4038 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSLARSVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDERECETASGLQDAYALCRVFKKTTVITPKVGGHYVNATSHANQISDQSSSIELYSEGRGEDLDSSNYLMPMDIGSLHNMRNDQTGFNINDESRNHEKLSHFSSEDPLFSLPTFSFANYGAITYPPSKVDIALECARMQHRFAMPPLEVEDFPQVGISELKMTQGSSSMHASTNETDILQEILSVAHASQELISQSNYSQEWGGNDTYAPREDDFTFMVGTNYNHINDMSSMRYVDKTWGDANPRCIEIGGMDEEFKAERTVENLRWVGMSKKDLEKMEEQKIVPIEDISNFQINREENEVQESEQHNSNKEHNDSDINDFSLDFINDDDPNNENFTEDGNMDDYSSSPSFEVVEEIKVNHGMFVSTRQVAETFFHQIVPSQTVQVHLNPVIANNLSIENAEAMMMILENKGSSFAAKFKAYVMGKLIKPSQTIASAIAFVCALMLMHCVYLKEEMEIWNDTCGGSACNMKRMSQSSEIIEWNESKEVWFFGVKSEKGFSTVLKKIGIFLTISLALCTMWANHIIVNP* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1268 661 Coils Coil 427 447 - -
Apr9g1268 661 MobiDBLite consensus disorder prediction 432 476 - -
Apr9g1268 661 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Apr9g1268 661 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Apr9g1268 661 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Apr9g1268 661 MobiDBLite consensus disorder prediction 432 452 - -
Apr9g1268 661 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 401 - -
Apr9g1268 661 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 401 - -
Apr9g1268 661 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1268 Apr-Chr9 22338108 22342506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1268 1 652 NAC Transcription Factor Family AT1G65910 44.955 2.52e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr9g1268 NAM 2.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1268 - - gmx:100809019 1027.7