Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1266 ATGGAGCAGGAACAACAAAGACTTGAAAGCTTCTTAACATGGGCAGCACAGCTTGGAATATCAGACTCATCAACCACTAGCCAACATCGACACTCTCTTTCCTCCTGTTTGGGTTCTTCTCTATCTGTCTCTCATTTTCCTCACTCTGGAGGGAGAGGTTTGGGTGCTGTGAGAGGACTTAAGAGGGGAGAAATTATTCTGAGAGTTCCAAAATCTGCTTTAATGACAAGGGAGAATGTTATGGAAGATAAAAAGCTCTGTGTTGCTGTGAATAGGCACTCTTCTCTGTCCTCAGCTCAGATATTGATTGTTTGCTTGTTGTATGAAATGGGTAAAGGAAAAACTTCGAGGTGGCATCCCTACCTAGTGCATTTGCCGAACACTTATGACATACTAGCCACATTTGGTGAATTTGAGAAGCGTGCTCTGCAAGTGGATGAGGCTCTATGGGTCACAGAGAAAGCTATAATAAAAGCCAAATCAGAGTGGAAAGAAGCTCATCCTTTGATGGAAGATCTCATGTTTAAGCCCCAGCTTTTAACATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCTCGGACGTTGCATATACCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCCCCTGGAGCAGAGCCATCTGGTATTGAGGGTGTAGAGCATTTGCTATCTAACTCTTCCATCCATGATACTGTCATATCAAATGAAGACGAGAATATAGCAATAGATGCAGAACAACTTGATTCTCATTCTCAGAGATTAACAGATGGCGGGTTTGAGGAAGATGTCAATGCATATTGCTTTTATGCCAGGGCACATTACAAGAAAGGAGATCAGGTTCTACTATGCTATGGAACTTACACAAATTTGGAGCTTCTTGAGCACTATGGGTTTCTCTTACAAGAAAATCCAAATGACAAAATTTTTATCCCTTTGGACCCTGCTATATATTCTTCCACTTCATGGTCTAAGGAATCACTCTACATTCATCATGATGGGAAGCCTTCCTTTGCACTACTAGCTGCGTTGCGGTTGTGGGCAACCCCTCAAAATAAGAGGAGGTATGTAGGACATCTTGCATATTCTGGTTCTCAACTGTCTGCAGACAATGAAATTTTTATTGTGAAATGGTTATCAAAAACTTGTGATGCTGTCTTAAAGAATCTGCCAACATCTGTCGATGAAGACACTATGCTCCTGAATGCAATGGTTTATAGTCAAGATTCCATGGACATCACAAAACTAATGTCTTTCAGGGATGAGATTTATAGCTTCTTAGAAGCTCATAATATGAAGGATGCGCATAGTTTTAATGATATATTTTTTTCTAGAAAAGCAAGAAGGTCCATGAACAGGTGGAAATTAGCTGTCCAATGGAGGCTCAGATACAAGAGAGTCCTTGCCGATTGTATCTCTTATTGCAATGAAACACTCAATTCTTTCATGACATAA 1482 0.4089 MEQEQQRLESFLTWAAQLGISDSSTTSQHRHSLSSCLGSSLSVSHFPHSGGRGLGAVRGLKRGEIILRVPKSALMTRENVMEDKKLCVAVNRHSSLSSAQILIVCLLYEMGKGKTSRWHPYLVHLPNTYDILATFGEFEKRALQVDEALWVTEKAIIKAKSEWKEAHPLMEDLMFKPQLLTFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGAEPSGIEGVEHLLSNSSIHDTVISNEDENIAIDAEQLDSHSQRLTDGGFEEDVNAYCFYARAHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKIFIPLDPAIYSSTSWSKESLYIHHDGKPSFALLAALRLWATPQNKRRYVGHLAYSGSQLSADNEIFIVKWLSKTCDAVLKNLPTSVDEDTMLLNAMVYSQDSMDITKLMSFRDEIYSFLEAHNMKDAHSFNDIFFSRKARRSMNRWKLAVQWRLRYKRVLADCISYCNETLNSFMT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1266 493 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 478 - -
Apr9g1266 493 Pfam SET domain 51 295 IPR001214 GO:0005515
Apr9g1266 493 Gene3D set domain protein methyltransferase, domain 1 4 309 - -
Apr9g1266 493 Gene3D - 325 492 IPR036464 -
Apr9g1266 493 CDD SET_LSMT 50 309 - -
Apr9g1266 493 Pfam Rubisco LSMT substrate-binding 343 477 IPR015353 -
Apr9g1266 493 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 305 488 IPR036464 -
Apr9g1266 493 PANTHER PROTEIN SET DOMAIN GROUP 40 4 478 - -
Apr9g1266 493 SUPERFAMILY SET domain 7 313 IPR046341 -
Apr9g1266 493 ProSiteProfiles SET domain profile. 39 295 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr9g1266 SET 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1266 - - gmx:100787452 847.04