Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1243 ATGAGTTCTCTGGCCATGCAAATCCACTTTGATTCCCAGTTTTTTACCTCACTTGTGTTGTTGATTGGCTTTACTGTATCGTTTATGTTATACAACACCCTTGTGAGGAAGCCAGAGAGACTTCGATCTAAGCTACGGAAACAAGGTATCAATGGTCCAACCCCAACTTTAATACTTGGAAATATAAGGGAGATAACGAAAAATAGACAACATACTGTTGCAAAGACTCCCGTTGAACTAGACCCTCATGCTTCTCATGACTGTGCTTCAATTCTCTTCCCTTTTTTTGAGAAATGGAGGCAGAAATATGGTCAAGTGTTTATGTTTTCCCTTGGAAACACACAAATATTGTATCTGGAACAACCTGACATAGTGAGAGATATCACCACATGCACGTCATTGGACTTGGGGAAGCCTGAATATCAGCGGAAAGAAAAAGGGCCGTTGCTTGGTCATGGAGTTATATCTTCAAATGGGACTATATGGGCCAATCAAAGGAAGATCATAGCTCCAGAACTATACATGGAGAAGGTTAAGGGAATGATGAGCATAATTAGTGAGCCTACTATTTCTCTGCTAAATATGTGGAGCAGTAGAATAGATTCAGAAGGTGGAACTGCAGATATAAAAATTGATGACGGCATAAGAAGATTCTCTGGTGATGTTATTTCAAAAGCATGCTTTGGAAGCAATTATTCAGAAGGAAAAGAAATTTTCTCAAAACTCGCAGCTCTCCAAGAGATCATGTCCAAGAAAAACTTTTCCTCTGGGATCCCAGGCATGAGATATATTCCAACGAAGAGCAATAAAGAATCATGGGCATTAGAAAAAGAGGTGAAAAATTGTATACTACAAGTGGTGAAGAAGAGAAAGGAAACTGCTAATGAGAATGACCTACTGCAAATGATTCTTGAGGGTGCTGAGAACAGGGATCTATCTCAGGAGGCCACTGAACGCTTCATTGTTGATAACTGCAAGAATATATACCTGGCAGGATATGAGACCACTGCAGTTGTTGCTACATGGTGCCTCATGTTACTGGCCTCAAATCAAGAGTGGCAAAATCGTGTTCGTGCTGAAGCACTGGAAATTTGTGAGGGTAAAATCCCAGATTATGGTATGCTTCATAAGATGAAGCAGCTGTCAACGGTTATTCATGAATCATTGCGTCTATATCCCCCTGTAGCTGTGATGTCAAGGGAAGCTTTCAAGGATATGAAGTTTGGGAACATTCATGTCCCAAAGGGTGTTAACATTTGGATAATGGTTTTGATCGCACAGACAAATCCTAATGTGTGGGGACATGATGCCTACAAATTCAACCCTGAAAGGTTTGCCAATGGGATCACAGGTGCTTGTAAGATGCCACATTTGTACATGCCCTTTGGGATAGGACCAAGAGTGTGTCTTGGAAGGGACTTGGCCATGATTGAACTTAAGATGATGTTATCTCGGATTTTGTCCAAATTCTTTTTCTGCCTCTCTCCTAAATACATTCATTCTCCTATACTTAGGCCCTTGATAGAGCCTGAACATGGAGTACATTTGCTGGTAAAAAAACTATGA 1566 0.4068 MSSLAMQIHFDSQFFTSLVLLIGFTVSFMLYNTLVRKPERLRSKLRKQGINGPTPTLILGNIREITKNRQHTVAKTPVELDPHASHDCASILFPFFEKWRQKYGQVFMFSLGNTQILYLEQPDIVRDITTCTSLDLGKPEYQRKEKGPLLGHGVISSNGTIWANQRKIIAPELYMEKVKGMMSIISEPTISLLNMWSSRIDSEGGTADIKIDDGIRRFSGDVISKACFGSNYSEGKEIFSKLAALQEIMSKKNFSSGIPGMRYIPTKSNKESWALEKEVKNCILQVVKKRKETANENDLLQMILEGAENRDLSQEATERFIVDNCKNIYLAGYETTAVVATWCLMLLASNQEWQNRVRAEALEICEGKIPDYGMLHKMKQLSTVIHESLRLYPPVAVMSREAFKDMKFGNIHVPKGVNIWIMVLIAQTNPNVWGHDAYKFNPERFANGITGACKMPHLYMPFGIGPRVCLGRDLAMIELKMMLSRILSKFFFCLSPKYIHSPILRPLIEPEHGVHLLVKKL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1243 521 Gene3D Cytochrome P450 38 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PANTHER CYTOCHROME P450 714C2 22 515 - -
Apr9g1243 521 Pfam Cytochrome P450 92 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1243 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Apr9g1243 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 515 - -
Apr9g1243 521 Coils Coil 290 310 - -
Apr9g1243 521 SUPERFAMILY Cytochrome P450 90 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1243 Apr-Chr9 22112727 22116176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1243 124 518 Cytochrome P450 AT5G24900 42.260 1.22e-116 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1243 K24544 - jre:108989179 752.666