Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1242 ATGGAGACAAATATACACATCATATCTTTAACAACACTGAAAATGAGTTCTCTGGCCATGCAAATCCACTTTGATTCCCAGTTTTTCCCATCACTTGTGTTGTTGATTGGCTTTACTGTATCGTTTATGTTATACAACACCCTTGTGAGGAAGCCAGAGAGAATTCGATCTAAGCTAAGGAAGCAAGGTATCAATGGTCCAACACCAACTTTACTACTTGGAAATATAACGGAGATAAAGAAAAATAGACAACATACTGTTGCAAAGTCTCCCGTTGAACTAGACCCTTATGCTTCTCATAACTGTGCTTCAATTCTCTTCCCTTTCTTTGAGAAATGGAGGCAGAAATATGGTCAAGTGTTTATGTTTTCCCTTGGAAACACACAAATATTGTATCTGGAACAACCTGACATAGTGAGAGATATCACCACATGCACATCATTGGACTTGGGGAAGCCTGAATATCAGCAGAAAGAAAAAGGGCCGTTGCTTGGTCATGGAGTTATATCTTCAAATGGGACTATATGGGCCAATCAAAGGAAGATCATAGCTCCAGAACTATACATGGAGAAGGTTAAGGGAATGATGAGCATAATTAGTGAGCCTACTATTTCTCTGCTAAATATGTGGAGCAGTAGAATAGATTCAGAAGGTGGAACTGCAGATATAAAAATTGATGACGGCATAAGAAGATTCTCTGGTGATGTTATTTCAAAAGCATGCTTTGGAAGCAATTATTCCGAAGGAAAAGAAATTTTCTCAAAACTCGCAGCTCTCCAAGAGATCATGTCCAAGAAAAACTTTTCCTCTGGGATCCCAGGCATGAGATACATTCCAACGAAGAGCAATAAAGAATCATGGGCATTAGAAAAAGAGGTGAAAAATTGTATACTACAAGTGGTGAAGAAGAGAAAGGAAACTGCTAATGAGAATGACCTACTGCAAATGATTCTTGAGGGTGCTGAGAACAGGGATCTATCTCAGGAGGCCACTGAACGCTTCATTGTTGATAACTGCAAGAATATATACCTGGCAGGATATGAGACCACTGCAGTTGTTGCTACATGGTGCCTCATGTTACTGGCCTCAAATCAAGAGTGGCAAAATCGTGTTCGTGCTGAAGCACTGGAAATTTGTGAGGGTAAAATCCCAGATTATGGTATGCTTCATAAGATGAAGCAGCTATCAAGGGTTATTCATGAATCATTGCGTCTATATCCCCCTGTAGCTGTGATGTCAAGGGAAGCTTTCAAGGATATGAAGTTTGGGAACATTCATGTCCCAAAGGGTGTTAACATTTGGACAATGGTTTTGATTGCACATACAAATCCTAATGTGTGGGGACATGATGCCTACAAATTCAACCCTGAAAGGTTTGCCAATGGGATCACAGGTGCTTGTAAGATGCCACATTTGTACATGCCCTTTGGGATAGGACCAAGAGTGTGTCTTGGAAGGGACTTGGCCATGATTGAACTTAAGATGTTGTTATCTCGGATTTTGTCCAAATTCTTTTTCTGCCTCTCTCCTAAATACATTCATTCTCCTATACTTAGGCCCTTGATAGAGCCTGAACATGGAGTACATTTGCTGGTGAAAAAACTATGA 1608 0.4017 METNIHIISLTTLKMSSLAMQIHFDSQFFPSLVLLIGFTVSFMLYNTLVRKPERIRSKLRKQGINGPTPTLLLGNITEIKKNRQHTVAKSPVELDPYASHNCASILFPFFEKWRQKYGQVFMFSLGNTQILYLEQPDIVRDITTCTSLDLGKPEYQQKEKGPLLGHGVISSNGTIWANQRKIIAPELYMEKVKGMMSIISEPTISLLNMWSSRIDSEGGTADIKIDDGIRRFSGDVISKACFGSNYSEGKEIFSKLAALQEIMSKKNFSSGIPGMRYIPTKSNKESWALEKEVKNCILQVVKKRKETANENDLLQMILEGAENRDLSQEATERFIVDNCKNIYLAGYETTAVVATWCLMLLASNQEWQNRVRAEALEICEGKIPDYGMLHKMKQLSRVIHESLRLYPPVAVMSREAFKDMKFGNIHVPKGVNIWTMVLIAHTNPNVWGHDAYKFNPERFANGITGACKMPHLYMPFGIGPRVCLGRDLAMIELKMLLSRILSKFFFCLSPKYIHSPILRPLIEPEHGVHLLVKKL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1242 535 Pfam Cytochrome P450 106 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 Gene3D Cytochrome P450 52 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Apr9g1242 535 PRINTS E-class P450 group I signature 114 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS E-class P450 group I signature 232 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 PANTHER CYTOCHROME P450 FAMILY MEMBER 38 529 - -
Apr9g1242 535 SUPERFAMILY Cytochrome P450 104 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g1242 535 Coils Coil 304 324 - -
Apr9g1242 535 PANTHER CYTOCHROME P450 714C2 38 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1242 Apr-Chr9 22096136 22098754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1242 138 532 Cytochrome P450 AT5G24900 42.998 7.74e-119 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1242 K24544 - jre:108989179 760.755