Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1234 ATGGAGGATTTCATTCTTTCCATCATAGCAAAGATTGCAGAATATGCAGTGGCTCCAATTTTACATCATGCTAAATACTTGTGCTGTTTCAACAACTTTGCTGGGAGTCTTCAAAATGCCAAAAGAGAATTGGAATTGACCCGAGACAGTGTGAATGAACATGTAAAAGAAGCCATTAATAGGAATGAAAAAATTGAACCAACTGTTGAGAAGTGGCGAAAAGAAGTGGAGAATGTCTTAGAAGAAGTGCAGAAGCTGGAAGTAAGAATTTATGAAGCAAACAAGAGCTATTTCAGAAGGCAATGCCAATATTTTCTTGTAAAAGAAATAGCAAGAACAACAGAAAAAATGACTCAACTCAATCATAACAGCAAATTTGAGCCATTTTCTAGGCTCACTGAACTTCCAGGCATGATGTACTACTCTTCAAAAAAATTTATTCTTTTCAAATCTACTGAATCAGCATACAAAAAGCTTTTGGAAACATTAAGAGATAATGATTCTTGGATGATTGGACTACATGGAATAGGAGGCTCAGGAAAAACTACTTTGGTGAAAGAGGTAGGTAAGAAAGCTGAGGAGTTAAATCTTTTTGAGAAGGTTGTCATGGTAACAGTCTCCCAAACTCCAAATATCAGAAGCATCCAAGCTCAAATTACTGATCAGTTGGGTTTCAAATTAGAGGAAGAATCAGATTTAGGTAGAGCACAAAGACTATCACAGAGATTAAGGAAAGGTACAACTCTTCTAATCATGGATGATGTATGGGAAAAGGTAGACTTTGAAGCTTTAGGAATTCCATTCAATGAAAATAGAAATGGTTGTAGAGTACTTCTAACAACTCGGAGTACAGAAGTATGCACTTCTATGCAATGCCAAAGTATAATTGAGCTCAGTCTCTTAACTGATGGAGAAGCTTGGAATTTGTTCAAATTGTATGCAAGCATAGATGATGACTCCCCAAATGCTTTGAAAGTTGTGGCAAGAAAAATTGTTAATGAATGTAAGGGATTGCCTATTGCGATTGTGACAGTGGGAAGCATGCTAAGGGGAAAAACTTTTGAAGTGTGGGAGTCAGCATTGTCAAGACTAGAAGATTCCAGACCACTGGATATTCCAAAAGGCTTAATAAATCCTTATGTAAGTCTTCAATTAAGTTATGATAATTTGACAAATCAATTAGCCAAGTCCTTGTTCTTGTTGTGTTCTATATTTCCTGAGGATCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGGGGATTGGGGCTAACTGAGAAATTTCGAACAATGGAGAAAGCAAGGAGGGAGATGCATCTAGCTGTTAACGTGCTTATGGATTCTTGCTTGTTGCTTCATGCCAATAAAAAAGAAAGGGTGAAAATGCATGACATGGTTCGTGATGTGGCCTTGTGGATAGCATCAGAAAGGGATCAAGCAATTTTGGCAAGTAATGTAATGGATCCAAGAACCATGGTAGAGGATGAAACAATAAAAGATAAGAGGGCAATATCCTTGTGGGAATTGAAAAATGGACAGCTTCTTGATGATCAATTGAATTGTTCAACACTTGAAGTTCTCCTGCTTCATTCACCAAATGTTAGCTTTAAAGTATCGAATGTGTGTCTTGAAGGGATGAAAATTCTTAAAGTCCTTGCATTCTTAACATTCGGTTATAAGTGGAATGTATATATACCAAGAATAACAAATACATCAACACTTACTGTGTCACTGCCACAGTCAATTGAGTCATTAAAAAATCTTAAAACTTTGTGCTTGAGAGGTTATAAATTAGGCGATTTCTCAATTTTGGAAAGCCTACAAGGACTTGAGATTCTTGACTTGCGTGGTTCTTCTTTTGAAGAATTGCCTAATGGAATTGTAGCATTAAAAAAACTGAAGCTTCTGGATTTGTTCAATTGCTGGATTGAGAAAAATAATACTTTTGAGGTAATAGCAAGGTGTTTGCAGCTAGAGGAACTATATTTGTATTTATGGAAGTTTGAAGGGAACTTGCCACATAATGTCTCTTTCTCAAGATTGCGGAGGTATGCTATATTGCAAGGCAAGATCAACATTGATTATTATGAAAAATTTTCTGACATGCAGATTAACATTTTGGAAAACCATAGACCGTCTAGAGCTTTATGCATAGAAGATTTCAATGCCTCTGCTCAAAGTTTTATGTCATTATCGATCAAAGATCTCTTTGTAAGAGCAGATGACCTTCATTTGATACGCCTTCAAGGAGGCTACAAAAATTTAATTCCAACCATGGATCAACAAGGTATGAATCAATTGATTTTTTTAATACTTGAACATTGTTCAGAGATAGAATGCCTGGTTGATAGCACTATCATTGCCGACACCAAAAATCCTCAATTGAACTCACTTCAGACAGCAGCTGTGTTCTCCAGCATAGTTACCTTAAGGTTGTTCCACATGCATGGCCTTCAAGAAGTGTTTCGTGATCCTGCTTTGCAATGCTCTCTCAAAAATTTAGAAGAATTAAGGATAGAAAATTGTAAGCAGTTATACAGCATATCCTTTCCAAGAAACTCAAAGCTAGGCAATCTTAAATTCTTGAAAATAGAAAGGTGCCAAATGCTAACTTCTCTCTTCATGCCATCCATTGCCCAAACACTAGAGCTGCTAGAGGAACTGAAAATATCTAAATGCAGTAAATTGAAGCATTTAATAGAAGTCGAAGAAGGGAATGTTGATCATGTCATCAATCAAAGTCATCCCACTTCGGTGCTCTCAAAATTAAGGATTCTTGATATTGAAGGATGTGAAAGTTTGGAATATATTTTCCCTGTGTTTTTTGCCCGATGTCTAAGGAGGTTGGAAGAGATGAGGATTCACAACAGTGCTGAGCTGAAGTATGTATTTGGCACAGAGAAGGAACATCGTCTTTTAGTGCACCAGAACGACAATCACCCCAAGACTAAAATTGAGATAAATTTGCCTAATTTTAGACGTCTCTCACTGAACTTATTATTGAATCTTATTGACATTTGGCCTGAATATTGCCATCCATGTTCACCAAATGTTAAAACATTAGAATTCAACAAATGTCCAAAATTGTCTAACTCTTCTGTGAGCAAAATGGTGATTGGTTCACATTTGCAACAAGACACAACTGCAATGGAGAAGGAAATACTGTGGGTGGTTGTCACAAACCAATTGTGTGATCAAATGTTTCCCTTGGATTTAAAAGTTGTCCTTGGCTTTAAAGTACTTATCTTCACTCATCTTAGAGCAGAAGGCATTTTTCAACTCCAAATCAGAGAACATGGGAGCAATAGAGAACAAAGTCCTTTGAACTTAGATCTATATGGTTTCTATTTGACTAATCTACCTGAGCTCAAGTTCATATGGAAGGGCCCCACAAAATTTCTAAGCCTCCAAGTGCTTAAATATTTTCGTGTGGATGGATGTCCAAAATTGAAAACCATATTCTCCCCTACCATTGTTAGAAGCTTACCCGAGCTGCGAAGTTTAAAAATATTGAACTGTGATGAATTAGAACAAATATTTGATTCTGGTGATGCAGAAGAACTCAAAAGCCTATATGCTTGTTCCCAACAAGTGTGCTTCCCAAAACTGTGGTATATTGAAGTTCAAAAGTGCAATAAGTTGAAATGCCTTTTCTATAATTTAATGGCTGGTCATTTTCCCAGTCTTGACTATTTGGAAATAAAAGAGTGCTCTCAATTAGAGAAGGTTTTTGATTTTGAACATGAAGCTGATGAAGAAGGTCAAGAAGGGACTAATAAGGATGGAGAACAACCACTGCTACAGAACCTGAGATTTATAATACTCAAAAGTTTGCTGAATTTCAAAGACATTCACCATGGATTTAAGTTAAAACATCATGTCAAACGGACCATAGAGAATTGCCCTAAATACTCTCCAAGAGCTTAA 3930 0.3641 MEDFILSIIAKIAEYAVAPILHHAKYLCCFNNFAGSLQNAKRELELTRDSVNEHVKEAINRNEKIEPTVEKWRKEVENVLEEVQKLEVRIYEANKSYFRRQCQYFLVKEIARTTEKMTQLNHNSKFEPFSRLTELPGMMYYSSKKFILFKSTESAYKKLLETLRDNDSWMIGLHGIGGSGKTTLVKEVGKKAEELNLFEKVVMVTVSQTPNIRSIQAQITDQLGFKLEEESDLGRAQRLSQRLRKGTTLLIMDDVWEKVDFEALGIPFNENRNGCRVLLTTRSTEVCTSMQCQSIIELSLLTDGEAWNLFKLYASIDDDSPNALKVVARKIVNECKGLPIAIVTVGSMLRGKTFEVWESALSRLEDSRPLDIPKGLINPYVSLQLSYDNLTNQLAKSLFLLCSIFPEDHEIDLEDLFRFGRGLGLTEKFRTMEKARREMHLAVNVLMDSCLLLHANKKERVKMHDMVRDVALWIASERDQAILASNVMDPRTMVEDETIKDKRAISLWELKNGQLLDDQLNCSTLEVLLLHSPNVSFKVSNVCLEGMKILKVLAFLTFGYKWNVYIPRITNTSTLTVSLPQSIESLKNLKTLCLRGYKLGDFSILESLQGLEILDLRGSSFEELPNGIVALKKLKLLDLFNCWIEKNNTFEVIARCLQLEELYLYLWKFEGNLPHNVSFSRLRRYAILQGKINIDYYEKFSDMQINILENHRPSRALCIEDFNASAQSFMSLSIKDLFVRADDLHLIRLQGGYKNLIPTMDQQGMNQLIFLILEHCSEIECLVDSTIIADTKNPQLNSLQTAAVFSSIVTLRLFHMHGLQEVFRDPALQCSLKNLEELRIENCKQLYSISFPRNSKLGNLKFLKIERCQMLTSLFMPSIAQTLELLEELKISKCSKLKHLIEVEEGNVDHVINQSHPTSVLSKLRILDIEGCESLEYIFPVFFARCLRRLEEMRIHNSAELKYVFGTEKEHRLLVHQNDNHPKTKIEINLPNFRRLSLNLLLNLIDIWPEYCHPCSPNVKTLEFNKCPKLSNSSVSKMVIGSHLQQDTTAMEKEILWVVVTNQLCDQMFPLDLKVVLGFKVLIFTHLRAEGIFQLQIREHGSNREQSPLNLDLYGFYLTNLPELKFIWKGPTKFLSLQVLKYFRVDGCPKLKTIFSPTIVRSLPELRSLKILNCDELEQIFDSGDAEELKSLYACSQQVCFPKLWYIEVQKCNKLKCLFYNLMAGHFPSLDYLEIKECSQLEKVFDFEHEADEEGQEGTNKDGEQPLLQNLRFIILKSLLNFKDIHHGFKLKHHVKRTIENCPKYSPRA* 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1234 1309 Gene3D Ribonuclease Inhibitor 1109 1254 IPR032675 -
Apr9g1234 1309 Gene3D - 387 472 IPR036388 -
Apr9g1234 1309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 402 IPR027417 -
Apr9g1234 1309 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 7 1187 - -
Apr9g1234 1309 PANTHER DISEASE RESISTANCE PROTEIN RP 7 1187 IPR044974 GO:0006952
Apr9g1234 1309 Gene3D Ribonuclease Inhibitor 694 967 IPR032675 -
Apr9g1234 1309 PRINTS Disease resistance protein signature 170 185 - -
Apr9g1234 1309 PRINTS Disease resistance protein signature 242 256 - -
Apr9g1234 1309 PRINTS Disease resistance protein signature 335 349 - -
Apr9g1234 1309 PRINTS Disease resistance protein signature 919 935 - -
Apr9g1234 1309 SUPERFAMILY L domain-like 462 1192 - -
Apr9g1234 1309 Pfam NB-ARC domain 153 388 IPR002182 GO:0043531
Apr9g1234 1309 Coils Coil 37 61 - -
Apr9g1234 1309 Gene3D Ribonuclease Inhibitor 512 693 IPR032675 -
Apr9g1234 1309 Gene3D - 300 386 IPR042197 -
Apr9g1234 1309 Gene3D - 138 297 IPR027417 -
Apr9g1234 1309 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1234 Apr-Chr9 21986164 21990369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1234 171 599 WRKY Transcription Factor Family AT5G45050 23.503 3.84e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1234 - - gmx:102662074 1654.03