Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1233 ATGCATCTTTCAAAGGGTTGTAGGGGTGAAGTTGTTTTTTGCTTGTGGTTCTGCTGCTATTTCCTATTGGCTGTTGGTCAGATCACTGACCCTACTGAAGTTGACGCATTGAGAACCATAAAGAAAAGTTTGATTGATATCAATAGAAATTTGAGCAGCTGGGATGGTGGAGACCCATGTACGTCTAACTGGATTGGGATTATGTGCACCAATACAACATTAGCCGATGACTATCTACATGTTAAACAATTGCAACTACTGAATTTGAATTTGTCTGGAAATTTAGCACCAGAGATTGGCAACTTATCTCATCTGGAAATACTGGATTTTATGTGGAACCACATAAGTGGGAGCATACCGAAGGAAATTGGCAATATCAAAACTTTGAAACTCTTACTCCTGAATGGAAATCAACTAACAGGTTCTCTGCCGGAAGAGCTTGGCTATCTTCCAGTCCTGAACAGATTACAAATTGATCAGAACAACATTTCAGGATCCATACCTTTGTCATTTGCAAACCTGAACAGCACACTACACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCACAGCTTTCCCAATTAGGAAGCCTTATTCACCTTCTTCTTGACAACAATAACTTCACAGGATATCTCCCACATGAGCTATCGGAGATGCCGAGCTTAAAGATACTTCAACTTGATAACAATAACTTCAGTGGAAATAGCATCCCAGATTCTTATGGAAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAACTGCCGTTTGCAAGGACCAATTCCTGATTTAAGCAGGATACCACACCTTGGTTATCTGGACCTCAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTTTCTGAAAATATCACAACCATTGACTTATCAAACAATAAGCTTACTGGAACAATTCCATCCAACTTTTCTGGTCTTCCACGTCTTCAGAAACTGTCAATTGCAATCAATTCATTGAGTGGCAATATTCCTTCCACCATTTGGCAGAACCAGACTTTAAATAGAACAGAACTACTAATCTTGGACATGCAACATAATCAACTTACAAGCATATCAGGCACTACAAATCTTCCTCCAAATGTCACACTCATGCTTGAGGGAAATCCTCTATGCCCAAATAATAGCACCTTAGTTCAGTTCTGTGGATCTGAAAGTGACAATGGCATAAATGGAAACACCAATGTTAGCTGCCCCAGTCAAGCATGTCCCCCTCCTTATGAATACACCGTGGAGTGTTTCTGCGCAGCTCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGATTTTCAGATTTCCATGCATACACGAGAACATTTGAGAGGTTCCTGACAGATGGTATTAATGTACATCTTAATCAGCTATTCATCAAGAGTTTTGAATGGGAAGAAAGACGGTTGAGAATGAACTTGAAGGTTTTTCCTGAATATGTTGACAGTACAAGCTCCCATGAATTTAACTCAAGTGAGGTTATTCGGATCCAAAACTTGTTCAGAGAATGGACCATTCATGACAGTGACTTGTTTGGTCCTTATGAACTTCTAGACTTCATTCTACTGGATCCTTACAGGGATTTGATTATCCCCTCTTCAAGTTCAGGGCTAAGTAAAGGTGCACTGGCTGGAATAGTCTTAGGTGCAATTGCCTGTGCAGTTACATTATCTGCAATTGTTACCATTCTTATATTGAGAATACGCTTGAGAGATTACCATACACTTACCAAACGGCGTAGAGCATCTAGGATCTCAGTAAAAATTGATGGTGTAAGATCATTTGATTACGAAGAAATGGCCTTGGCCACACACAATTTTAGTGACTCTGATCAAATTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGTCATCTAAAAGATGGTACTGCTGTTGCCATAAAACGTGCACAAGAGGGTTCATTGCAAGGTGAGAGGGAGTTCCTTACAGAAATACAATTGCTATCAAGGTTACATCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATATATGCCAAATGGAACGCTAAGGGATCACCTTTCTGCTTACTCAAAAGAACCTCTTGGTCTTTCCATGAGGTTGAAGATTGCTCTAGAATCAGCTAAAGGTCTACTATATCTACACACAGAAGCTAATCCTCCAATATTCCACCGAGATGTCAAGGCTAGCAATATATTATTGGACTCGAGATTCACAGCAAAAGTTGCTGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGGTCATGTATCAACAGTGGTGAAGGGGACCCCGGGTTACCTTGATCCTGAGTACTTCCTAACTCACAAGTTGACTGATAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTGTCACTGGGAGGCCACCAATCTTGCATGGTGAAAATATTATTAGACAGGTTAATGCGGCATACCAATCTGGTGGAATAATTTCGGTTGTTGATAAACGTATTGAATCTTATCCTATTGAGTATGTGGAGAGATTTTTGACTTTAGCCTTAAAGTGTTGCAAAGATGCGACAGATGAGAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAATACATTTATTCTATGATACCAGAGTCTGATACCAAGAGAGCTGAATATGTTACAAGTGATTCTTCTGGCACCATATTCAGTTCACAACCTTCATCATCTACTGTAAAGCCTCCTTTTATTTCAGGAGATGTGTCAGGTAGTGACCTAGTGAGTGGAGATATACCAACCATTAGGCCAAGATAG 2835 0.4007 MHLSKGCRGEVVFCLWFCCYFLLAVGQITDPTEVDALRTIKKSLIDINRNLSSWDGGDPCTSNWIGIMCTNTTLADDYLHVKQLQLLNLNLSGNLAPEIGNLSHLEILDFMWNHISGSIPKEIGNIKTLKLLLLNGNQLTGSLPEELGYLPVLNRLQIDQNNISGSIPLSFANLNSTLHFHMNNNSLSGQIPPQLSQLGSLIHLLLDNNNFTGYLPHELSEMPSLKILQLDNNNFSGNSIPDSYGNMSKLLKLSLRNCRLQGPIPDLSRIPHLGYLDLSFNQLNESIPTNKLSENITTIDLSNNKLTGTIPSNFSGLPRLQKLSIAINSLSGNIPSTIWQNQTLNRTELLILDMQHNQLTSISGTTNLPPNVTLMLEGNPLCPNNSTLVQFCGSESDNGINGNTNVSCPSQACPPPYEYTVECFCAAPLIVHYRLKSPGFSDFHAYTRTFERFLTDGINVHLNQLFIKSFEWEERRLRMNLKVFPEYVDSTSSHEFNSSEVIRIQNLFREWTIHDSDLFGPYELLDFILLDPYRDLIIPSSSSGLSKGALAGIVLGAIACAVTLSAIVTILILRIRLRDYHTLTKRRRASRISVKIDGVRSFDYEEMALATHNFSDSDQIGQGGYGKVYKGHLKDGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKEPLGLSMRLKIALESAKGLLYLHTEANPPIFHRDVKASNILLDSRFTAKVADFGLSRLAPVPDIEGNVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELVTGRPPILHGENIIRQVNAAYQSGGIISVVDKRIESYPIEYVERFLTLALKCCKDATDERPKMAEVARELEYIYSMIPESDTKRAEYVTSDSSGTIFSSQPSSSTVKPPFISGDVSGSDLVSGDIPTIRPR* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1233 944 Gene3D Transferase(Phosphotransferase) domain 1 690 906 - -
Apr9g1233 944 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Apr9g1233 944 ProSiteProfiles Leucine-rich repeat profile. 348 369 IPR001611 GO:0005515
Apr9g1233 944 SMART serkin_6 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1233 944 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 920 - -
Apr9g1233 944 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Apr9g1233 944 Gene3D Ribonuclease Inhibitor 184 293 IPR032675 -
Apr9g1233 944 MobiDBLite consensus disorder prediction 903 924 - -
Apr9g1233 944 CDD STKc_IRAK 620 884 - -
Apr9g1233 944 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 920 - -
Apr9g1233 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Apr9g1233 944 Gene3D Ribonuclease Inhibitor 294 396 IPR032675 -
Apr9g1233 944 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Apr9g1233 944 ProSiteProfiles Leucine-rich repeat profile. 85 106 IPR001611 GO:0005515
Apr9g1233 944 Gene3D Phosphorylase Kinase; domain 1 584 689 - -
Apr9g1233 944 MobiDBLite consensus disorder prediction 903 944 - -
Apr9g1233 944 SUPERFAMILY Protein kinase-like (PK-like) 599 905 IPR011009 -
Apr9g1233 944 SUPERFAMILY L domain-like 45 401 - -
Apr9g1233 944 Pfam Protein kinase domain 615 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1233 944 ProSiteProfiles Protein kinase domain profile. 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1233 Apr-Chr9 21973176 21984179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1233 18 896 Receptor kinase-like Gene Family AT5G01950 56.663 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Apr9g1233 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1233 - - gmx:100801035 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1914 10 32157134 32168112 Apr9g1233 9 21973176 21984179 PCT