Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g1233 | ATGCATCTTTCAAAGGGTTGTAGGGGTGAAGTTGTTTTTTGCTTGTGGTTCTGCTGCTATTTCCTATTGGCTGTTGGTCAGATCACTGACCCTACTGAAGTTGACGCATTGAGAACCATAAAGAAAAGTTTGATTGATATCAATAGAAATTTGAGCAGCTGGGATGGTGGAGACCCATGTACGTCTAACTGGATTGGGATTATGTGCACCAATACAACATTAGCCGATGACTATCTACATGTTAAACAATTGCAACTACTGAATTTGAATTTGTCTGGAAATTTAGCACCAGAGATTGGCAACTTATCTCATCTGGAAATACTGGATTTTATGTGGAACCACATAAGTGGGAGCATACCGAAGGAAATTGGCAATATCAAAACTTTGAAACTCTTACTCCTGAATGGAAATCAACTAACAGGTTCTCTGCCGGAAGAGCTTGGCTATCTTCCAGTCCTGAACAGATTACAAATTGATCAGAACAACATTTCAGGATCCATACCTTTGTCATTTGCAAACCTGAACAGCACACTACACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCACAGCTTTCCCAATTAGGAAGCCTTATTCACCTTCTTCTTGACAACAATAACTTCACAGGATATCTCCCACATGAGCTATCGGAGATGCCGAGCTTAAAGATACTTCAACTTGATAACAATAACTTCAGTGGAAATAGCATCCCAGATTCTTATGGAAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAACTGCCGTTTGCAAGGACCAATTCCTGATTTAAGCAGGATACCACACCTTGGTTATCTGGACCTCAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTTTCTGAAAATATCACAACCATTGACTTATCAAACAATAAGCTTACTGGAACAATTCCATCCAACTTTTCTGGTCTTCCACGTCTTCAGAAACTGTCAATTGCAATCAATTCATTGAGTGGCAATATTCCTTCCACCATTTGGCAGAACCAGACTTTAAATAGAACAGAACTACTAATCTTGGACATGCAACATAATCAACTTACAAGCATATCAGGCACTACAAATCTTCCTCCAAATGTCACACTCATGCTTGAGGGAAATCCTCTATGCCCAAATAATAGCACCTTAGTTCAGTTCTGTGGATCTGAAAGTGACAATGGCATAAATGGAAACACCAATGTTAGCTGCCCCAGTCAAGCATGTCCCCCTCCTTATGAATACACCGTGGAGTGTTTCTGCGCAGCTCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGATTTTCAGATTTCCATGCATACACGAGAACATTTGAGAGGTTCCTGACAGATGGTATTAATGTACATCTTAATCAGCTATTCATCAAGAGTTTTGAATGGGAAGAAAGACGGTTGAGAATGAACTTGAAGGTTTTTCCTGAATATGTTGACAGTACAAGCTCCCATGAATTTAACTCAAGTGAGGTTATTCGGATCCAAAACTTGTTCAGAGAATGGACCATTCATGACAGTGACTTGTTTGGTCCTTATGAACTTCTAGACTTCATTCTACTGGATCCTTACAGGGATTTGATTATCCCCTCTTCAAGTTCAGGGCTAAGTAAAGGTGCACTGGCTGGAATAGTCTTAGGTGCAATTGCCTGTGCAGTTACATTATCTGCAATTGTTACCATTCTTATATTGAGAATACGCTTGAGAGATTACCATACACTTACCAAACGGCGTAGAGCATCTAGGATCTCAGTAAAAATTGATGGTGTAAGATCATTTGATTACGAAGAAATGGCCTTGGCCACACACAATTTTAGTGACTCTGATCAAATTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGTCATCTAAAAGATGGTACTGCTGTTGCCATAAAACGTGCACAAGAGGGTTCATTGCAAGGTGAGAGGGAGTTCCTTACAGAAATACAATTGCTATCAAGGTTACATCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATATATGCCAAATGGAACGCTAAGGGATCACCTTTCTGCTTACTCAAAAGAACCTCTTGGTCTTTCCATGAGGTTGAAGATTGCTCTAGAATCAGCTAAAGGTCTACTATATCTACACACAGAAGCTAATCCTCCAATATTCCACCGAGATGTCAAGGCTAGCAATATATTATTGGACTCGAGATTCACAGCAAAAGTTGCTGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGGTCATGTATCAACAGTGGTGAAGGGGACCCCGGGTTACCTTGATCCTGAGTACTTCCTAACTCACAAGTTGACTGATAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTGTCACTGGGAGGCCACCAATCTTGCATGGTGAAAATATTATTAGACAGGTTAATGCGGCATACCAATCTGGTGGAATAATTTCGGTTGTTGATAAACGTATTGAATCTTATCCTATTGAGTATGTGGAGAGATTTTTGACTTTAGCCTTAAAGTGTTGCAAAGATGCGACAGATGAGAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAATACATTTATTCTATGATACCAGAGTCTGATACCAAGAGAGCTGAATATGTTACAAGTGATTCTTCTGGCACCATATTCAGTTCACAACCTTCATCATCTACTGTAAAGCCTCCTTTTATTTCAGGAGATGTGTCAGGTAGTGACCTAGTGAGTGGAGATATACCAACCATTAGGCCAAGATAG | 2835 | 0.4007 | MHLSKGCRGEVVFCLWFCCYFLLAVGQITDPTEVDALRTIKKSLIDINRNLSSWDGGDPCTSNWIGIMCTNTTLADDYLHVKQLQLLNLNLSGNLAPEIGNLSHLEILDFMWNHISGSIPKEIGNIKTLKLLLLNGNQLTGSLPEELGYLPVLNRLQIDQNNISGSIPLSFANLNSTLHFHMNNNSLSGQIPPQLSQLGSLIHLLLDNNNFTGYLPHELSEMPSLKILQLDNNNFSGNSIPDSYGNMSKLLKLSLRNCRLQGPIPDLSRIPHLGYLDLSFNQLNESIPTNKLSENITTIDLSNNKLTGTIPSNFSGLPRLQKLSIAINSLSGNIPSTIWQNQTLNRTELLILDMQHNQLTSISGTTNLPPNVTLMLEGNPLCPNNSTLVQFCGSESDNGINGNTNVSCPSQACPPPYEYTVECFCAAPLIVHYRLKSPGFSDFHAYTRTFERFLTDGINVHLNQLFIKSFEWEERRLRMNLKVFPEYVDSTSSHEFNSSEVIRIQNLFREWTIHDSDLFGPYELLDFILLDPYRDLIIPSSSSGLSKGALAGIVLGAIACAVTLSAIVTILILRIRLRDYHTLTKRRRASRISVKIDGVRSFDYEEMALATHNFSDSDQIGQGGYGKVYKGHLKDGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKEPLGLSMRLKIALESAKGLLYLHTEANPPIFHRDVKASNILLDSRFTAKVADFGLSRLAPVPDIEGNVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELVTGRPPILHGENIIRQVNAAYQSGGIISVVDKRIESYPIEYVERFLTLALKCCKDATDERPKMAEVARELEYIYSMIPESDTKRAEYVTSDSSGTIFSSQPSSSTVKPPFISGDVSGSDLVSGDIPTIRPR* | 945 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g1233 | 944 | Gene3D | Transferase(Phosphotransferase) domain 1 | 690 | 906 | - | - | |
Apr9g1233 | 944 | ProSitePatterns | Protein kinases ATP-binding region signature. | 620 | 642 | IPR017441 | GO:0005524 | |
Apr9g1233 | 944 | ProSiteProfiles | Leucine-rich repeat profile. | 348 | 369 | IPR001611 | GO:0005515 | |
Apr9g1233 | 944 | SMART | serkin_6 | 614 | 886 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr9g1233 | 944 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 12 | 920 | - | - | |
Apr9g1233 | 944 | Gene3D | Ribonuclease Inhibitor | 31 | 183 | IPR032675 | - | |
Apr9g1233 | 944 | Gene3D | Ribonuclease Inhibitor | 184 | 293 | IPR032675 | - | |
Apr9g1233 | 944 | MobiDBLite | consensus disorder prediction | 903 | 924 | - | - | |
Apr9g1233 | 944 | CDD | STKc_IRAK | 620 | 884 | - | - | |
Apr9g1233 | 944 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 12 | 920 | - | - | |
Apr9g1233 | 944 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 734 | 746 | IPR008271 | GO:0004672|GO:0006468 | |
Apr9g1233 | 944 | Gene3D | Ribonuclease Inhibitor | 294 | 396 | IPR032675 | - | |
Apr9g1233 | 944 | Pfam | Leucine rich repeat N-terminal domain | 31 | 69 | IPR013210 | - | |
Apr9g1233 | 944 | ProSiteProfiles | Leucine-rich repeat profile. | 85 | 106 | IPR001611 | GO:0005515 | |
Apr9g1233 | 944 | Gene3D | Phosphorylase Kinase; domain 1 | 584 | 689 | - | - | |
Apr9g1233 | 944 | MobiDBLite | consensus disorder prediction | 903 | 944 | - | - | |
Apr9g1233 | 944 | SUPERFAMILY | Protein kinase-like (PK-like) | 599 | 905 | IPR011009 | - | |
Apr9g1233 | 944 | SUPERFAMILY | L domain-like | 45 | 401 | - | - | |
Apr9g1233 | 944 | Pfam | Protein kinase domain | 615 | 880 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr9g1233 | 944 | ProSiteProfiles | Protein kinase domain profile. | 614 | 886 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g1233 | Apr-Chr9 | 21973176 | 21984179 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g1233 | 18 | 896 | Receptor kinase-like Gene Family | AT5G01950 | 56.663 | 0.0 | 966 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Apr9g1233 | Pkinase | 1.6e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g1233 | - | - | gmx:100801035 | 1502.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g1914 | 10 | 32157134 | 32168112 | Apr9g1233 | 9 | 21973176 | 21984179 | PCT |