Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1231 ATGGTAGAGGCTACTTTGAATTCAATTGTCAACATCTTATACCATATGGCAAAAAAACTCTCCATGAAGTTCTACTCCCCTCAAGTGCATCCTTTCCTTTTTATCATTGTTATTCTTTGTCCTTTGGTTTTTGCTGACCTAAGTTCTGATAAGCAAGCCCTTCTTGATTTTTCCACTGCTGTTCCCCATCGTCGGAACCTTAAGTGGGATCCAAACAGTTCAGTTTGTACATCTTGGGTAGGCATCACTTGCAATTCAAATGGCACTCGTGTGGTTTCTGTTCGGCTCCCCGGAATCGGACTAGTAGGCACCATCCCTGCCAACACACTTGGCAAGATTGACTCACTCAAAAATATCAGCCTCCGCTCCAACTTACTCAGTGGAAGTCTACCGGCTGATATTACTTCCCTTCCTTCTCTACAATATCTATACCTTCAGCATAATAACCTTTCTGGTGATATACCTACCTCATTGTCTTCCCGCCTCAATGTACTTGATTTGTCATACAATTCCTTCACTGGTGCTATTCCAAAGACATTACAAAATTTAACACAACTAACTAGATTGAACCTGCAAAACAACTCCCTATCTGGACAGATACCAAATCTCAATGTCACTAAGCTCAGACACTTGAATATAAGCTATAACCATTTGAATGGATCTATCCCTGCTGCTCTTAAGATTTTCCCAAATTCTTCCTTTGAGGGTAACTCTCTTTGTGGATTACCTCTAAAGTCATGTTCTGCAGTTTCTCCTACTCCTCCTCCCTCATCAACACCTGCTCCATCATCGACTCCTGAAAGACATAGCTCAAAAAATAAACTGAGTAAGGTAGCTATCATTGCAATTGCTGTTGGTGGAGCTGTGGTATTGTTTTTTGTAACTCTTGTCATTGTTCTTTGCTGTTTAAAGAAAAAAGATGAGGGAAGAAGCCCCAGAGAAACTAAAACCAAGGGTCCTAGTGGTGGGAGGAGTGAGAAGCCAAAAGAGGAGTTTGGTAGTGGGGTGCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCTGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCTGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATTTTGGAGGAGTCAACAACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTAGGCAAAAGGGAATTTGAACAGCAGATGGAGATAGTAGGAAGGGTTGGCCAGCACCCAAATGTTGTGCCACTTCGTGCTTATTATTATTCAAAGGATGAGAAGCTTTTGGTTTATGACTATATCCCAAGTGGCAATCTATCTACCCTCTTGCATGGCAATAGGGCAAGTGGAAGAACTCCATTAGATTGGAACTCCCGAGTAAGAATCTCTCTTGGAATTGCCAAAGGAATTGCTCACATACATTCTGTTGGTGGTCCAAAATTCACCCATGGCAATGTCAAATCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGTCTAACTCCGCTTATGAATATTCCTGCAACCCCTTCTAGAGCCGCAGGTTATCGTGCTCCTGAGGTTATTGAAACTCGTAAGCACACTCATAAATCAGATGTGTACAGCTTTGGAGTCCTCCTTCTGGAAATGCTTACAGGGAAAGCACCACAACAGTCTCCAGGACGCGATGACATGGTTGATCTTCCTAGATGGGTTCAGTCTGTTGTTAGGGAGGAGTGGACAGCTGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGGTTCCAGATATGAGGCCTAGCATGGTGGAAGCGGTGAGAATGATCGAAGAGATTCGGCTATCTGACTCAGAGAACCGGCCATCTTCCGAAGAGAATAAATCCAACAAGGACTCAACTGCTCCAACTCCATAA 1974 0.4281 MVEATLNSIVNILYHMAKKLSMKFYSPQVHPFLFIIVILCPLVFADLSSDKQALLDFSTAVPHRRNLKWDPNSSVCTSWVGITCNSNGTRVVSVRLPGIGLVGTIPANTLGKIDSLKNISLRSNLLSGSLPADITSLPSLQYLYLQHNNLSGDIPTSLSSRLNVLDLSYNSFTGAIPKTLQNLTQLTRLNLQNNSLSGQIPNLNVTKLRHLNISYNHLNGSIPAALKIFPNSSFEGNSLCGLPLKSCSAVSPTPPPSSTPAPSSTPERHSSKNKLSKVAIIAIAVGGAVVLFFVTLVIVLCCLKKKDEGRSPRETKTKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVYDYIPSGNLSTLLHGNRASGRTPLDWNSRVRISLGIAKGIAHIHSVGGPKFTHGNVKSSNVLLNQDNDGCISDFGLTPLMNIPATPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMVEAVRMIEEIRLSDSENRPSSEENKSNKDSTAPTP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1231 657 MobiDBLite consensus disorder prediction 309 337 - -
Apr9g1231 657 MobiDBLite consensus disorder prediction 633 657 - -
Apr9g1231 657 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Apr9g1231 657 PANTHER OS05G0588300 PROTEIN 15 656 - -
Apr9g1231 657 Gene3D Transferase(Phosphotransferase) domain 1 437 654 - -
Apr9g1231 657 PANTHER LRR RECEPTOR-LIKE KINASE 15 656 - -
Apr9g1231 657 MobiDBLite consensus disorder prediction 633 647 - -
Apr9g1231 657 ProSiteProfiles Protein kinase domain profile. 361 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1231 657 Gene3D Phosphorylase Kinase; domain 1 329 436 - -
Apr9g1231 657 ProSitePatterns Protein kinases ATP-binding region signature. 367 398 IPR017441 GO:0005524
Apr9g1231 657 ProSiteProfiles Leucine-rich repeat profile. 139 161 IPR001611 GO:0005515
Apr9g1231 657 Gene3D Ribonuclease Inhibitor 161 249 IPR032675 -
Apr9g1231 657 Pfam Protein kinase domain 364 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1231 657 CDD STKc_IRAK 367 632 - -
Apr9g1231 657 MobiDBLite consensus disorder prediction 251 270 - -
Apr9g1231 657 Pfam Leucine rich repeat 105 150 IPR001611 GO:0005515
Apr9g1231 657 SUPERFAMILY Protein kinase-like (PK-like) 365 639 IPR011009 -
Apr9g1231 657 SUPERFAMILY L domain-like 60 231 - -
Apr9g1231 657 Pfam Leucine Rich Repeat 207 227 IPR001611 GO:0005515
Apr9g1231 657 Pfam Leucine Rich Repeat 162 183 IPR001611 GO:0005515
Apr9g1231 657 Gene3D Ribonuclease Inhibitor 49 160 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1231 Apr-Chr9 21939558 21944446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1231 21 652 Receptor kinase-like Gene Family AT5G58300 68.446 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g1231 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1231 - - gmx:100776232 1109.75