Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1228 ATGGCGGATGAAACGCAAAATGATACGAAGGAGGAGGTTGCAGAAATTGCACCATTTGATCCTACTAAGAAGAAAAAGAAGAAGAAAATTACAATTGTAGATCCTGCTGATGACTCAGTGGACAAATTGACTGAGAAAACAGAAAACCTCTCTGTTTCTGATGGGGTCGAGACTCCATTTGCTGGTTTGAAAAAGAAGAAGAAGCCTGTTGAAATCAGTAACTTGAATGACGAGAGTGGCGACGCAATTGAAGAGTTGGATGATCAAGCTGAAGATGATGAAGGAGAAATGGTTGCTTCTCAGGCTGGTTATCCTTGGGAAGGGAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGATCGCCGAAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAGACAGTGTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGATCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCCCTCGATGGACAGCAGAGATTGGTTGTAAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATATGTCATTTGCCTTGGATGCAAGAGTCCAGACACTATACTTACAAAGGAGAACCGTCTGTTCTTTCTCCGCTGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCAGAAGGAACACGGGGACATAA 804 0.4378 MADETQNDTKEEVAEIAPFDPTKKKKKKKITIVDPADDSVDKLTEKTENLSVSDGVETPFAGLKKKKKPVEISNLNDESGDAIEELDDQAEDDEGEMVASQAGYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1228 267 MobiDBLite consensus disorder prediction 1 30 - -
Apr9g1228 267 Pfam Domain found in IF2B/IF5 136 245 IPR002735 GO:0003743|GO:0006413
Apr9g1228 267 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 216 251 IPR016190 GO:0003743|GO:0006413
Apr9g1228 267 SMART eIF2Bneu4 137 246 IPR002735 GO:0003743|GO:0006413
Apr9g1228 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 267 IPR045196 GO:0003743|GO:0006413
Apr9g1228 267 MobiDBLite consensus disorder prediction 1 22 - -
Apr9g1228 267 Gene3D - 110 252 - -
Apr9g1228 267 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 112 219 IPR016189 GO:0003743|GO:0006413
Apr9g1228 267 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1228 Apr-Chr9 21904638 21909534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1228 1 265 Eukaryotic Initiation Factors Gene Family AT5G20920 75.836 2.39e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1228 K03238 - gmx:100783618 491.5