Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1218 ATGTTTTGTAAGAGAGAAAACAAGGAAGATGGCATGGCAGAACATCTCTATGTGGAAACCGACCCAGCTGGTCGCTATGGTAGGTTTGGAGAAGTTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAAGCTCTTGGAATAGAGGTAGCATGGAACCAGGTTAGACTCAATGAGGCACTTCGCACCCCGGACGATTTGCAGCGGCTTTACTCAGAGGTTCATCTTCTCAGTACCCTCAAACACCAATCCATCATACGATTCTACACTTCTTGGATTGATGTTGAGAACAGGGCCTTCAACTTTGTTACAGAAATGTTTACATCAGGGTCACTGAGAGAATATAGAAAGAAATATAAGCGTGTCAGCATACAAGCAATAAAGAGTTGGGCACGCCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCTGTGATCCATAGAGATCTCAAATGTGATAACATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACTTGGGACTGGCTGCAATTCTTCGCGGTTCCCAGCCAGCTCACAGTGTTATTGGCACCCCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAGCTTGCTGACGTGTACTCATTTGGAATGTGTGTATTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAGATTTATAAGAAAGTGACATCGGGGAAACTACCATTGGCATTTTTTCGGATTGAAGACTTGGAAGCACAAAGGTTTATTGGAAAATGCTTATTACCTGCAGCAAAGAGACCGTCAGCAAAAGATTTATTGCTTGACCCTTTTCTTGTGTCAAATGAGTCATCATCGACAATTAAGTTTGGGATTCAGAAGCCATTTTTGAATGACAGTGAGATGGAAAAACTGCAATTGAGCGATGATCGTCCTAGGACAGGAATGAAAGTAATAGGGAAACTGAATCCTGAAGATGATACCATCTTTCTCAAAGTGCAAATTTCTGATAATGATGGTTCTGTTAGAAATGTATTTTTTCCCTTTGACATTTTGACTGACACTCCCATTGACGTTGCAACTGAGATGGTGAAAGAATTGGAGATTTCTGATTGGGAGCCTTTTGAGATTGCAAATATGATTGACAGAGAAATATCTGCTCTGATACCACACAGGAGGCAAAGTAACTGTCCAGATGCTTTCCACACATTCAGTTATCATGATTATGATGATGATGATGATGGACCTCATCATCATTTCCACTCGCTCTCTTCTTGTTCATCATTCCAAGAATCAGTATCAGATTTAGTTAGTAAAGCTGAGCAAATATCAAGTGGATATTATTGGTTCAATGATGATTTGCATGATGATACCAGCTCGCGATGCTCGTCACAAGGGACATATTCCAACTTGAATTACTATTCTATGGATGATCAAGAGTACAATGTGTCTTCTATGAGAAAAGATAAACTTCCCATCATGAAGAGTCACAAGGGTACAAGGTTTTCCCCCGGTGAAGACTTAAGCAATTTCAACCAGGGCAAAGTCTTAGTAGGATCACAAACTCCTCCTACTAGTAAAAGTAAAATATTGATGAACAATCGTAGATTAACAAGAAACAGGTCATTAATTGATATTCGGAGCCAACTATTACACCGATCTTTGGTGGAAGAGGTAAGCAAGAGACGGTTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTTCCACAAAAAAGTCACAGCCTGTATGTGTTCCTTCAAGGAGTGGCAAGGGAGAAAAACTTAAGAGATAA 1833 0.4021 MFCKRENKEDGMAEHLYVETDPAGRYGRFGEVLGKGAMKTVYKAIDEALGIEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVENRAFNFVTEMFTSGSLREYRKKYKRVSIQAIKSWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPLAFFRIEDLEAQRFIGKCLLPAAKRPSAKDLLLDPFLVSNESSSTIKFGIQKPFLNDSEMEKLQLSDDRPRTGMKVIGKLNPEDDTIFLKVQISDNDGSVRNVFFPFDILTDTPIDVATEMVKELEISDWEPFEIANMIDREISALIPHRRQSNCPDAFHTFSYHDYDDDDDGPHHHFHSLSSCSSFQESVSDLVSKAEQISSGYYWFNDDLHDDTSSRCSSQGTYSNLNYYSMDDQEYNVSSMRKDKLPIMKSHKGTRFSPGEDLSNFNQGKVLVGSQTPPTSKSKILMNNRRLTRNRSLIDIRSQLLHRSLVEEVSKRRLFKTVGAVENIGFQAPCDVSTKKSQPVCVPSRSGKGEKLKR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1218 610 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Apr9g1218 610 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1218 610 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Apr9g1218 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 6 596 - -
Apr9g1218 610 MobiDBLite consensus disorder prediction 590 610 - -
Apr9g1218 610 CDD STKc_WNK 25 285 - -
Apr9g1218 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Apr9g1218 610 Gene3D Phosphorylase Kinase; domain 1 12 108 - -
Apr9g1218 610 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1218 610 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1218 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1218 Apr-Chr9 21717518 21722036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1218 17 591 MAP Kinase Kinase Kinase AT5G58350 61.340 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr9g1218 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1218 K08867 - gmx:100272203 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1873 10 31705077 31733953 Apr9g1218 9 21717518 21722036 PCT