Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1213 ATGCCGGAAAGCGAACACGCGGCGGAGAGCACCGCCCTGTTCGGGAAATACGAGGTCGGAAGACTCCTGGGATGCGGCGCCTTCGCGAAGGTGTACCACGCGCGGAACATCGAAACAGGACAGAGCGTGGCGGTGAAGGTGATTAGCAAGAAGAAGATAGCCGCATCGGGGTTAGTGTCCAACGTGAAGCGCGAGATCTCTATCATGAGCCGTCTCCACCACCCAAACATCGTGAGACTCTACGAAGTGTTAGCCACAAAAACCAAAATCTACTTCGTATTGGAATTCGTCAAGGGCGGTGAACTCTTCGGGAAAATCGCTAAGGGCCGATTCAGCGAAGACCTCGCTCGCCGTTACTTTCATCAGCTTATCTCCGCCGTCGCGTACTGCCATGCGCGCGGCGTTTTCCACCGCGACTTGAAACCGGAGAATCTCCTCCTCGACGAGCACGGGAATCTCAAGGTGTCGGATTTTGGACTGAGCGCAGTGAAGGAGCAGATCCACGTGGATGGGTTGCTTCACACGCTTTGTGGAACCCCTGCTTACGTGGCCCCGGAGATTTTAGCGAAGAAGGGTTACGACGGGGCTAAGGTTGATGTTTGGTCGTGTGGGGTTATTCTGTTTGTTCTTGTTGCTGGGTATCTTCCTTTTAACGATCCTAATTTGATGGTCATGTATAGGAAGATTTACAAAGGTGAATTTCGGTGTCCGAGGTGGTTTTCGATTGAGTTGCGAAGGTTTTTGGCGAGATTGTTGGATACGAATCCCGATAAGAGGATAACCGTTGATGAGATTCTTAAGGATATTTGGTTTAAGAAGGGGTATAAGGAGGTGAGGGTTCACGAAGAGGTGAAGAATGTGGATAGTGGTGGGAGTGGGGGTGATAAGGTGAAGGAGTTGAATGCTTTTGATATTATTTCGTTTTCTTCGGGGTTGAACCTTTCGGGGCTGTTTGATTCCTCGTGTGGTGGGGAGGGGGAGAGGATTTTGCTGAGGGAGTCGCCGGAGGAGGTGGTGGAGAAGGTGGTGACGGCAGCGAAGGCGGAGGGGCTCGCCGTGAGGACGAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTAATGGTAATTTGGGGGTTTTGGTGGAGGTTTACAGGTTACCGGGAGAGATGGTTGTGGTTGAGGTTAGAAGGAGGGATGGGGATGTTGGGGTATTTAGAGATGTGTGGAGGAATAAGCTGAGGCCTCACCTCTGTGCTGCCAGCAGTAGTACGACGTCGGATCGGGATGACGACGACAAGTCTTAG 1284 0.5241 MPESEHAAESTALFGKYEVGRLLGCGAFAKVYHARNIETGQSVAVKVISKKKIAASGLVSNVKREISIMSRLHHPNIVRLYEVLATKTKIYFVLEFVKGGELFGKIAKGRFSEDLARRYFHQLISAVAYCHARGVFHRDLKPENLLLDEHGNLKVSDFGLSAVKEQIHVDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLVAGYLPFNDPNLMVMYRKIYKGEFRCPRWFSIELRRFLARLLDTNPDKRITVDEILKDIWFKKGYKEVRVHEEVKNVDSGGSGGDKVKELNAFDIISFSSGLNLSGLFDSSCGGEGERILLRESPEEVVEKVVTAAKAEGLAVRTRKECGVELEGCNGNLGVLVEVYRLPGEMVVVEVRRRDGDVGVFRDVWRNKLRPHLCAASSSTTSDRDDDDKS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1213 427 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1213 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Apr9g1213 427 Gene3D Kinase associated domain 1, KA1 300 413 - -
Apr9g1213 427 PANTHER - 5 421 - -
Apr9g1213 427 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 421 - -
Apr9g1213 427 SUPERFAMILY Protein kinase-like (PK-like) 14 280 IPR011009 -
Apr9g1213 427 Pfam NAF domain 298 354 IPR004041 GO:0007165
Apr9g1213 427 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Apr9g1213 427 CDD CIPK_C 301 411 - -
Apr9g1213 427 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Apr9g1213 427 Gene3D Transferase(Phosphotransferase) domain 1 7 299 - -
Apr9g1213 427 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1213 427 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1213 Apr-Chr9 21680671 21682465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1213 1 419 CBL-interacting serine-threonine protein kinases AT2G30360 62.818 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g1213 Pkinase 2.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1213 - - gmx:100815088 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1869 10 31677098 31678828 Apr9g1213 9 21680671 21682465 PCT