Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1212 ATGTCTACAATGGAGAATACATCAAATATCTTGATGCAAAAATATGAATTAGGAAGATTACTCGGCCAAGGTACCTTTGGAAAGGTTTACTATGGACGAAGTACAATAACTAACCAAAGTGTGGCTCTTAAAGTGATTGACAAGGATAAGGTTGTCAAAACTGGACAAGCTGATCATATTAAGAGGGAAATATCTGTTATGAGAATGGTCAGACATCCACATATAATTCATCTTTTTGAGGTAATGGCCACGAAGAGTAAGATTTACTTTGTTCTGGAATATGCTAAAGGTGGTGAGCTCTTTAGAAAGGTGGCCAAAGGAAAGCTCAAAGAAGAAGTTGCACACAAGTATTTTAGACAGCTAATCAATGCAGTGGATTTTTGTCACAGTAGAGGCGTGTACCACAGAGATATAAAGCCAGAGAACATTCTGTTGGATGAGAATGAGAACCTTAAGGTGTCAGATTTTGGGTTAAGTGCCCTGGCTGAGTCCAAACGACGCGACGGTTTGCTGCACACAACTTGTGGAACACCTGCCTATGTCGCTCCTGAGGTCATCCAAAGGAAAGGTTATGATGGCGCCAAAGCCGATATTTGGTCTTGTGGGGTGGTTTTGTTTGTGTTACTGGCAGGTCATATTCCTTTTCATGACTCAAATTTGATGGAGATGTATAGGAAGATAAGCAAGGCAGAGTTTACATGTCCTAATTGGTTCCCAAGAGCGGTTCAGCGTCTATTGTCCAAGATGTTGGATCCAAATCCTGACACTAGGATTTCCATAGACAAGATTAAGAAATGTTCTTGGTATAGGAAAGGGCCATATGGTAGACAAAAAACACATGAAGGGGAAAACAAGGCTGTCCCTCCCGCGGTTAGAAATAATTCTGAACAATGCAATGACAATGACGGTCTAGCAGCCGAAGCGAGAAAAGAGTCAGTAGTGCCAGTTAGTATAAATGCCTTTGATATCATCTCCCTTTCACCCGGTTTTAATCTTTGTGGATTTTTTGAAGACAGTATTGAGAAAAGGGAAGCAAGGTTCACTTCAAGGCAACCTGCATCAGTCATCATATCTAAGCTCGAAGAAATTGCTAAGAGACTGAAGCTGAAAATAAGGAAAAGAGCTGCAGGTTTGTTGAAATTGGAGGGCCTTAAAGAAGGTAGGAAGGGGATTTTATCCATTGATGCTGAGATCTTTGAGGTTACTCCACTTTTGCATTTGGTAGAGGTGAAAAAATCAAATGGAGACACATTGGAATATCATAAAATATTGAAAGAGGACATAAGGCCTGCTCTCCATGATATTGTTTGGGTTTGGCAAGGTGATCAGCAAGAGCAATCACAACAGTTGGAGCAACACCAATCAGAGTCATAA 1374 0.4076 MSTMENTSNILMQKYELGRLLGQGTFGKVYYGRSTITNQSVALKVIDKDKVVKTGQADHIKREISVMRMVRHPHIIHLFEVMATKSKIYFVLEYAKGGELFRKVAKGKLKEEVAHKYFRQLINAVDFCHSRGVYHRDIKPENILLDENENLKVSDFGLSALAESKRRDGLLHTTCGTPAYVAPEVIQRKGYDGAKADIWSCGVVLFVLLAGHIPFHDSNLMEMYRKISKAEFTCPNWFPRAVQRLLSKMLDPNPDTRISIDKIKKCSWYRKGPYGRQKTHEGENKAVPPAVRNNSEQCNDNDGLAAEARKESVVPVSINAFDIISLSPGFNLCGFFEDSIEKREARFTSRQPASVIISKLEEIAKRLKLKIRKRAAGLLKLEGLKEGRKGILSIDAEIFEVTPLLHLVEVKKSNGDTLEYHKILKEDIRPALHDIVWVWQGDQQEQSQQLEQHQSES* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1212 457 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Apr9g1212 457 Gene3D Kinase associated domain 1, KA1 318 438 - -
Apr9g1212 457 MobiDBLite consensus disorder prediction 274 297 - -
Apr9g1212 457 Pfam NAF domain 315 373 IPR004041 GO:0007165
Apr9g1212 457 SUPERFAMILY Protein kinase-like (PK-like) 11 291 IPR011009 -
Apr9g1212 457 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1212 457 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1212 457 CDD CIPK_C 319 432 - -
Apr9g1212 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Apr9g1212 457 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 453 - -
Apr9g1212 457 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1212 457 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Apr9g1212 457 PANTHER - 5 453 - -
Apr9g1212 457 Gene3D Transferase(Phosphotransferase) domain 1 5 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1212 Apr-Chr9 21670363 21673301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1212 4 445 CBL-interacting serine-threonine protein kinases AT5G58380 67.686 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr9g1212 Pkinase 6.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1212 - K07198 gmx:100779316 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1865 10 31658571 31663109 Apr9g1212 9 21670363 21673301 PCT