Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1209 ATGTTTGGATATCCAGAGACAGAAAGATTAGATGAGATAGCGAGGGTCAGAACAGAAGGAGAAGCATCTCCTCAAATGGGAAGGAAGCATTTTTATGGTCCAACATCTGGGACAGCCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTTTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTTTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGCAGCCGTTCACAAAGTGTTTGGTGCAAGCAATGTCTCAAAGATGTTAATGGAGGTGCCAGAGGGCCAAAGAGCTGATGCAGCAAATAGCTTGGTTTATGAAGCTAATTTGAGGCTGAGAGATCCAGTGTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAATCTCTGCAAGCAGAATTAAATGCAATAAGAGCTGAGATAATAAAATACAAATATAGAGAAGCTGCAAGTCTTATTTCTTCTCATCATGCAGCTTTGGTTTCTACAGCTGAAGCAGTATCAGCAGCAATTTCTACAGACTCACAAGGTCTTTCTCAACCTCTTCCTCCTCCATCCCCAGTTCCTCCTCCTCCTCCTCCACCAAAACCATTACCTTCTCCTTCTGTTATTCTCTCATCCTTGTCTTCATCTTCAACTTCTTCTGTGTACACTCCACCTAAAAGCACAATGAGCCATGGATCCATTTCCAGTACTGAAAATGTCCCATACTTTGTTTAG 732 0.4262 MFGYPETERLDEIARVRTEGEASPQMGRKHFYGPTSGTALNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIRAEIIKYKYREAASLISSHHAALVSTAEAVSAAISTDSQGLSQPLPPPSPVPPPPPPPKPLPSPSVILSSLSSSSTSSVYTPPKSTMSHGSISSTENVPYFV* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1209 243 Pfam Lateral organ boundaries (LOB) domain 45 141 IPR004883 -
Apr9g1209 243 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Apr9g1209 243 PANTHER LOB DOMAIN PROTEIN 30 242 - -
Apr9g1209 243 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 242 - -
Apr9g1209 243 Coils Coil 124 151 - -
Apr9g1209 243 MobiDBLite consensus disorder prediction 184 205 - -
Apr9g1209 243 MobiDBLite consensus disorder prediction 176 243 - -
Apr9g1209 243 MobiDBLite consensus disorder prediction 206 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1209 Apr-Chr9 21643204 21644232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1209 26 158 AS2 family AT2G30340 77.612 4.46e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr9g1209 LOB 8.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1209 - - ccaj:109795340 355.525