Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1206 ATGGCACTTTCTTCTTCTCGATATTCTCCCTTCTCATCTTCATCTTCAACAACCATTTTCTCTACAGCTTTGTGCATGTTTTTGCTTATCGGGAGTTCTTCGGCTCAACTCTCTGAGAACTTCTATGCTAAGAAATGTCCCAAGGTTTTCTATGCTGTAAAATCAGTTGTTCAATCTGCTGTGGCTAAAGAACCTCGCATGGGAGCATCTCTCCTTCGCCTCTTCTTTCATGACTGCTTTGTCAATGGTTGTGATGGATCAGTACTGCTTGATGACACTTCCTCCTCCAAAGGAGAGAAGACTGCACCACCCAACAATAAATCTTTGAGAGGTTTTGAGGTCATCGATGCCATCAAGTCTAAGGTGGAGGCTGTATGCCCCGGAGTAGTGTCTTGTGCTGATGTTGTAGCTATTGCTGCTCGTGACTCTGTTGCAATTCTTGGAGGGCCTTTTTGGAAGGTTAAACTTGGAAGAAGGGATTCCAAGACAGCCAGTTTCAAGGATGCAAGCAGTGGTGTGATCCCATCTCCCTTTTCTACCCTAAGCAACCTTATCTCAAGGTTTCAAGCTCAAGGGCTCTCTGCCAAGGACATGGTTGCCCTGTCTGGAGCCCACACAATTGGGAAAGCAAGGTGTGTTACTTTCAGAGATCGTGTATACAATGACACAAACATTAACAGTTTATTTGCTAATGCAAGGAGGAGGAACTGTCCAAGGATTAGTGGCTCAATAAAAGACAATAATGTAGCAGTGCTAGACTTCAAAACTCCAAACCATTTTGACAACAACTATTACAAGAACCTCATTAGCAAAAAGGGTCTCCTTCATTCTGATCAAGTACTCTTCAATGGAGGATCTACTGATTCATTGGTTAGAGCTTACAGCAATAATCCAAGGGCCTTTGCATCTGACTTTGTTACAGCAATGATTAAGATGGGAAACATAAAACCTTTGACTGGGTCAAAAGGAGAGATTAGAAGGCACTGTAGGAGAGCCAATTAG 1002 0.4311 MALSSSRYSPFSSSSSTTIFSTALCMFLLIGSSSAQLSENFYAKKCPKVFYAVKSVVQSAVAKEPRMGASLLRLFFHDCFVNGCDGSVLLDDTSSSKGEKTAPPNNKSLRGFEVIDAIKSKVEAVCPGVVSCADVVAIAARDSVAILGGPFWKVKLGRRDSKTASFKDASSGVIPSPFSTLSNLISRFQAQGLSAKDMVALSGAHTIGKARCVTFRDRVYNDTNINSLFANARRRNCPRISGSIKDNNVAVLDFKTPNHFDNNYYKNLISKKGLLHSDQVLFNGGSTDSLVRAYSNNPRAFASDFVTAMIKMGNIKPLTGSKGEIRRHCRRAN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1206 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Apr9g1206 333 Gene3D - 40 330 - -
Apr9g1206 333 Gene3D Peroxidase, domain 2 175 312 - -
Apr9g1206 333 SUPERFAMILY Heme-dependent peroxidases 36 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 CDD secretory_peroxidase 36 331 IPR033905 GO:0004601|GO:0042744
Apr9g1206 333 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PANTHER PEROXIDASE 14 332 - -
Apr9g1206 333 PANTHER PEROXIDASE 72-RELATED 14 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 Pfam Peroxidase 53 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 ProSiteProfiles Plant heme peroxidase family profile. 36 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1206 333 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1206 Apr-Chr9 21605617 21609202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1206 35 333 Peroxidase AT5G05340 66.890 1.86e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1206 K00430 - gmx:100812478 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1862 10 31624027 31628054 Apr9g1206 9 21605617 21609202 PCT