Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1202 ATGGATTCTCATCTCCAATCTTCCCTTGTTCTTGCTATGGTCACCTTGGCAACATTTCTGATCCCTAACTTTGCACAGCTCACTCCTGATTATTATGACAAAGTTTGCCCTCAGGCGTTGCCAGTCATTAAGTCAGTTGTTCAACAGGCAATTATTCGTGAATCACGCTTGGGAGCATCCTTACTTCGATTGCATTTCCATGATTGCTTTGTGAATGGCTGTGATGGATCAGTTCTGCTAGATGACACCCCTTTCTTCGTGGGCGAGAAGACTGCATTTCCAAATATTAATTCACTTAGAGGCTTTGATGTGGTTGATGAAATTAAAGCAGCGGCTGACAATGCTTGCCAACGTCCCCTAGTATCATGTGCAGATATCTTAGCTATAGCAGCTCGTGATTCTGTAGCCATATTGGGGGGTCCACAATATTGGTACCAAGTGTTATTAGGGAGAAGAGATGCAAGATATGCAAGCAGGGATGCTGCAAATCTCAATCTTCCCCCTCCATTCTTGAACTACTCACAGCTTCTTACAAATTTCCAATCTCATGGGCTGGACCTTAAAGACCTTGTGGTCCTCTCTGGTGGCCACACCATTGGATTGGCAAAGTGCAGTTCCTTCAAGGACAGAATCTACAATGACACCAACATAGACCCTGGTTTTGCAGCTACTCTGCGTAATTCATGCCCTCGAAGTGGCAATGACAATAGTTTATCACCACTTGATGCAGCATCTCCTGCAAAATTTGACAATACATATTATACAGCTTTGTTGAATAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTATTCAAAGGTGTTGATTGTGAAAGTGATAGATTGGTGCAACTATATAGCAATGACCCTTATGCTTTTGCTAGAGACTTTGGAGCTTCCGTTATTAAGATGGGTAACATGAAGCCTCTTATTGGGGATAAGGGAGAGATCAGGTATAATTGCAGAAAAGTCAACTATTAG 978 0.4264 MDSHLQSSLVLAMVTLATFLIPNFAQLTPDYYDKVCPQALPVIKSVVQQAIIRESRLGASLLRLHFHDCFVNGCDGSVLLDDTPFFVGEKTAFPNINSLRGFDVVDEIKAAADNACQRPLVSCADILAIAARDSVAILGGPQYWYQVLLGRRDARYASRDAANLNLPPPFLNYSQLLTNFQSHGLDLKDLVVLSGGHTIGLAKCSSFKDRIYNDTNIDPGFAATLRNSCPRSGNDNSLSPLDAASPAKFDNTYYTALLNKKGLLHSDQELFKGVDCESDRLVQLYSNDPYAFARDFGASVIKMGNMKPLIGDKGEIRYNCRKVNY* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1202 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PANTHER PEROXIDASE 72-RELATED 8 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 Gene3D - 30 321 - -
Apr9g1202 325 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 PANTHER CATIONIC PEROXIDASE 8 324 - -
Apr9g1202 325 Gene3D Peroxidase, domain 2 167 303 - -
Apr9g1202 325 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr9g1202 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Apr9g1202 325 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Apr9g1202 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1202 Apr-Chr9 21571424 21573904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1202 25 324 Peroxidase AT5G05340 53.311 3.15e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1202 K00430 - gmx:100810852 533.102