Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1201 ATGGCCTTTCACTCCTGTGGCTACATATTTTCTTTCTCCATTTTGTTTTGCATGTTTGTCATGGCCTCTTCTCAGTTAACTTCAAATTGCTATGAATCAACATGCCCTCAAGCTCTCTCTATCATCAGATCCACAGTGATCAGTGCAGTTGCCAAAGAGCATCGCATGGGCGCGTCCTTGCTTCGTCTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGCATCTGTTCTGTTGGATGACACTTCGACCTTCACTGGAGAGAAGTCAGCTGGTGCAAATGTGAATTCTCTTAGAGGTTTTGAAGTAATTGATGACATTAAAACTAAAGTGGAGGCTGCTTGTCCCGGAGTTGTTTCTTGTGCAGATATTCTAGCTATTGCTGCCCGTGATTCCGTTGTTACATTGGGAGGTCCATCATGGAATGTTGGGTTAGGCAGACAAGATTCAACCACGGCAAGTAAAGATGCTGCCACTAGGGATATCCCATCCCCACTAATGGATCTTAGTGCCCTTATATCTGCTTTTGACAATAAAGGGTTTAACACCAAGGAGATGGTAGCCCTTGCAGGAGCTCATACAACGGGGCTAGCCAGGTGTCAACTATTCAGAGGTCGGATTTACAATGAAAGTAGCAGCATTGAGTCAAACTTTGCAACATCACTCAAGTCAAACTGTCCAAGCACTGGTGGAGACACCAACCTTTCCCCACTTGATGTCACCACAAGTGTGATATTTGACAATGCTTATTTCAAGAATCTGATCAACAAAAAGGGACTTCTACATTCGGATCAGCAGTTATTCAGTGGTGGCTCTACAGATTCTCAGGTCACTGACTATAGCAACAACCCTACAGCTTTCTATGTAGACTTTGCTAGTGCCATGGTGAAAATGGGAAACCTTAGCCCTTTGACAGGGAAAAGTGGCCAGATTCGTACTAATTGCCGTAAAGTTAATTAA 960 0.4365 MAFHSCGYIFSFSILFCMFVMASSQLTSNCYESTCPQALSIIRSTVISAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSTFTGEKSAGANVNSLRGFEVIDDIKTKVEAACPGVVSCADILAIAARDSVVTLGGPSWNVGLGRQDSTTASKDAATRDIPSPLMDLSALISAFDNKGFNTKEMVALAGAHTTGLARCQLFRGRIYNESSSIESNFATSLKSNCPSTGGDTNLSPLDVTTSVIFDNAYFKNLINKKGLLHSDQQLFSGGSTDSQVTDYSNNPTAFYVDFASAMVKMGNLSPLTGKSGQIRTNCRKVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1201 319 Pfam Peroxidase 43 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PANTHER PEROXIDASE 72-RELATED 18 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 CDD secretory_peroxidase 25 318 IPR033905 GO:0004601|GO:0042744
Apr9g1201 319 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 ProSiteProfiles Plant heme peroxidase family profile. 25 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 PANTHER PEROXIDASE 18 319 - -
Apr9g1201 319 Gene3D Peroxidase, domain 2 163 298 - -
Apr9g1201 319 SUPERFAMILY Heme-dependent peroxidases 25 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr9g1201 319 Gene3D - 31 316 - -
Apr9g1201 319 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1201 Apr-Chr9 21563889 21566539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1201 21 319 Peroxidase AT5G05340 62.126 4.87e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1201 K00430 - gmx:100777191 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1860 10 31603720 31605674 Apr9g1201 9 21563889 21566539 PCT