Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1196 ATGCCTTCAACAACTTTTCAATGGCTAAGCCTTGTGGGCATCATTTGGCTTCAATCCATAAATGGAACAAACACAAATTTCCCTGCATACTCCTCTCAGTTGAAGCAACTCCTTTGCATGTCCCAAGTTCAGCTCAACAATCTTGCTTTTGCCTCAGATGCAGGCAAACTTTTTGGCTTTTTTTCTGGCATGGCTGCAGTTTACCTACCCCTTTGGGTTGTCCTGATGATTGGATCAACTCTTGGTTTAGTTGGTTATGGTGTGCAATATCTCTTCACAACAAACAATATTTCCTCACTCTCCTATTGGCATGTTTTCATACTAACAGTTTTAGCAGGAAATAGCATTTGTTGGATTAACACTGTCTGCTATGTGGTCACAATAAGGAACTTCTCATCAGATCGCCAAGTTGCTGTGGGATTAACAACTAGTTACCAAGGGCTAAGTGCTAAGATTTATACCAGCATTGTTGACGCTGTTCCTGGACACAAAAAAGCTAGAACCTTTCTTTTTCTAAACTCAGTCTTACCTTTGATAGTTGGCCTAATTGCAGCTCCTGTAGTCAGAGAAATTGATGTCACAAGGCCTAAACACATGGGTGTTGGATTTGTTGTTATGTTTGTCATTACAATTGCCACTGGAATATATGCTGTGATCAGCAGCTTGCAATTTGTGTCAAGCAAAATATCTCCATTGGGTAGTCTTTTGGGTGTTCTAATGTCCCTTCTATTCCCTCTATTAGTTCCGCTTTCCATGAAGATCAATGCACTAGTGGGTTCATGGCACAAAAATAGAGAAAAACAAAGAGTTTATCATTTTACAGTGGAGGAGGGTCAGAGCAGTAATGAAGAGAGGACAGATAATGAGGTGAAAGAGGGTGAAGATATCAGAAGAGTTCAAGAAGTAGGTGTAAGAGAAGAAATTGGAGTGAAACTGATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTCTACTTATTTGGTGCAACACTTGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCCGGGGTTACTCTAGTACTTCATCTTTGGTGTCCTTGTCTTCTTCTTTTGGGTTCTTTGGCCGTCTCATGCCATCTATTATGGACTACTTTTATAGGGGTAAGTGTACTATATCAAGACCAGCTTCTATGATGGCATTAATGGCTCCAACTGCTGGAGCATTCTTCTTACTTCTCAATAAAACTCACCTTGCCCTTTATATTAGCACTGCCATAATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACCACCACTGAGCTATTTGGAACCAAGAATTTCTCTGTGAACCATAATGTGGTTGTGGCCAATATTCCAGTAGGTTCCTTTCTTTTTGGCTATTCTGCTGCCCTTGTTTACCATAAGGAAGGGCATGAACATGGAAAATGCATGGGCATGGAATGCTACAGAAACACTTTCATCATTTGGGGTTCTCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTTTACACGCTAGGACTCGCAAGTTTTACTCACATAAACAATAG 1554 0.4015 MPSTTFQWLSLVGIIWLQSINGTNTNFPAYSSQLKQLLCMSQVQLNNLAFASDAGKLFGFFSGMAAVYLPLWVVLMIGSTLGLVGYGVQYLFTTNNISSLSYWHVFILTVLAGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLSAKIYTSIVDAVPGHKKARTFLFLNSVLPLIVGLIAAPVVREIDVTRPKHMGVGFVVMFVITIATGIYAVISSLQFVSSKISPLGSLLGVLMSLLFPLLVPLSMKINALVGSWHKNREKQRVYHFTVEEGQSSNEERTDNEVKEGEDIRRVQEVGVREEIGVKLMLRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYSSTSSLVSLSSSFGFFGRLMPSIMDYFYRGKCTISRPASMMALMAPTAGAFFLLLNKTHLALYISTAIIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPVGSFLFGYSAALVYHKEGHEHGKCMGMECYRNTFIIWGSLCFFGTFLALILHARTRKFYSHKQ* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1196 517 SUPERFAMILY MFS general substrate transporter 7 511 IPR036259 -
Apr9g1196 517 Pfam Nodulin-like 7 249 IPR010658 -
Apr9g1196 517 Gene3D MFS general substrate transporter like domains 270 507 IPR036259 -
Apr9g1196 517 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 516 - -
Apr9g1196 517 CDD MFS_Mch1p_like 7 499 - -
Apr9g1196 517 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1196 Apr-Chr9 21484139 21486119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1196 1 516 Nodulin-like Gene Family AT2G30300 47.438 1.59e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1196 - - gmx:100808034 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1857 10 31571209 31574554 Apr9g1196 9 21484139 21486119 PCT