Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1195 ATGCAGCAAATTATGGAATCCAATGATGGAGATGGTGCTGCCAAACTGCTTCGAGCTCAAACCCACATATGGAATCACATTTTTGACTTCATAAATTCCATGTCCCTTAAATGTGCTGTCGATTTAGGAATACCAGATATCATACACAACTATGGTCAACCCATGCCACTTTCAAATCTCCTTGCTTCACTACCCATCCACCCTTCAAAAACCCACTTCATCCCTCGCTTGATGCGAATCTTGACCCATTCTGGCTTCTTCTCTCAACACAGTGACACTGAGAATGAGCTTCAGGTAAAGTATGTGCTAACTGATGAATCTATGCTATTGCTTAAGAACCATCCCATGAGTGTCACTCCTTTCTTGCATGCCATGCTTAATCCCATTTTCACAACTCCATGGAATCAATTTTCTACTTGGTTCCAAAATGATGATCCTACACCATTTGAAACAACACACGGGATGTTGTTTTGGAATTGTGTTGCCCGTGACCCAAAACTTAATACCCAATTCAATGATGCCATGGCTACTGATAATCAATTGCTGAGTAGTTTGGTGATTGAGAAGTGCAAAGGGGTGTTCGACGGATTGCAGTCATTGGTTGATGTTGGGGGAGGTGCAGGGACTTTGGCAATGGGCATTGCCAAATCATTCCCACAGATGGAATGCATTGTATTAGATCTACCACATGTTGTTGCTGACTTGCAAGGAAGTGAGAACCTTAGATATGTTGGAGGGAACATGTTTGAGGCAATTCCTCCAGCTGATGCCGTTTTGTTGAAGTGGATATTGCATGCCTATAATGATAAGGAGTGTGTGGACATTTTGAAGAAAAGCAAGGAGGCAATCGAGAGGAGAGGCAACAAAGGGAAGGTGATTATCATAGACATGGTGATGGATAATGAAAAGAGAGATGATGAATCAGTTGAAACACAACTCTTCTTTGATATGCTGATGATGGTGTTGGCCCCTGGAAAAGAGAGAAACAAGAAAGAATGGGTCAAGTTGATTACTTCAGCTGGTTTCAGTGACTACAAGATAACTCCAGTTTTTGGTCTAAGGTCTCTCATAGAGATCTATCCATAG 1086 0.4199 MQQIMESNDGDGAAKLLRAQTHIWNHIFDFINSMSLKCAVDLGIPDIIHNYGQPMPLSNLLASLPIHPSKTHFIPRLMRILTHSGFFSQHSDTENELQVKYVLTDESMLLLKNHPMSVTPFLHAMLNPIFTTPWNQFSTWFQNDDPTPFETTHGMLFWNCVARDPKLNTQFNDAMATDNQLLSSLVIEKCKGVFDGLQSLVDVGGGAGTLAMGIAKSFPQMECIVLDLPHVVADLQGSENLRYVGGNMFEAIPPADAVLLKWILHAYNDKECVDILKKSKEAIERRGNKGKVIIIDMVMDNEKRDDESVETQLFFDMLMMVLAPGKERNKKEWVKLITSAGFSDYKITPVFGLRSLIEIYP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1195 361 Pfam O-methyltransferase domain 134 343 IPR001077 GO:0008171
Apr9g1195 361 Gene3D - 5 110 IPR036388 -
Apr9g1195 361 PANTHER O-METHYLTRANSFERASE 12 361 - -
Apr9g1195 361 SUPERFAMILY "Winged helix" DNA-binding domain 15 115 IPR036390 -
Apr9g1195 361 Gene3D Vaccinia Virus protein VP39 111 361 IPR029063 -
Apr9g1195 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 361 IPR016461 GO:0008168
Apr9g1195 361 Pfam Dimerisation domain 34 82 IPR012967 GO:0046983
Apr9g1195 361 PANTHER O-METHYLTRANSFERASE 12 361 IPR016461 GO:0008168
Apr9g1195 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Apr9g1195 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1195 Apr-Chr9 21465330 21467444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1195 34 359 Monolignol Biosynthesis Gene Families AT5G54160 30.120 9.51e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1195 - - gmx:100781008 587.03