Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1193 ATGGAATCCCACGATGAAGATCATGCCACCAAAGTGATTCAAGCTCAAACCCACATATTGAATCACATTTTTAGCTTCATAAACTCCATGTCCCTTAAATGTGTAGTTGACTTAGGCATACCAGATATCATACACAACTATGGCCAACCCATGTCACTCTCAAACCTTATTGCTTCACTACCAATCCATCCATCCAAAACCCAATCCATCTATCGTTTGATGCGAATCTTGATCCATTCTGGCTTCTTCTCTCAAAAAAATGTCACTGAGAATGAGCTAGAAGTAGAGTATGTGTTAACTGATGCATCTATGCTATTGCTCAAGAACCATCCAATGAGTGTGACTCCTATGTTGCATGCCATGCTTGATCCCATTTTGACAAAGCCATGGAATCAATTTTCAACTTGGTTCAAAAATGGTGATCCTACACCGTTTGAAACAACACACGGGATTTTGTTTTGGGATTATGCTAACCGTGAACCCAAATTTAATCACTTGTTCAATAATGCCATGACATGTGATGCTCGATTGGTGACTAGTATGGTGATTGAGAAGTGCAAATGGGTGTTCGCGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGAACTATGGCAAAGGCCATTGCCAAATCATTCCCACAGTTAGAATGCATTGTATTTGATCTCCCACATGTTGTTGCTGGCTTGCAAGAAACTGAGAACTTAAGATATGTTGGAGGAGACATGTTCAAGGAAATTCCTCCAACTGACGCCATTTTGTTGAAGTGGATATTACATGATTGGAACGATGATGAATGCATGAACATACTAAAGAAGTGTAAGGAGGCAATCACTAGGAAAGGCAAAGGAGGGAAGGTGATTATCATAGACATAGTGATGGATACTGAGAAGAGTGATAATGAATCAGTGGAAACACAACTCATGTTGGATATGCTGATGATGGTTTTGGTCACTGGAAAAGAGAGAAATAAGAAAGAATGGGTCAAGTTGATTACTTCAGCTGGTTTCAGTGACTATAAGATAACTCCTGTTTTGGGCTTAAGGTCCCTCATTGAGATCTATCCTTAA 1074 0.4032 MESHDEDHATKVIQAQTHILNHIFSFINSMSLKCVVDLGIPDIIHNYGQPMSLSNLIASLPIHPSKTQSIYRLMRILIHSGFFSQKNVTENELEVEYVLTDASMLLLKNHPMSVTPMLHAMLDPILTKPWNQFSTWFKNGDPTPFETTHGILFWDYANREPKFNHLFNNAMTCDARLVTSMVIEKCKWVFAGLESLVDVGGGTGTMAKAIAKSFPQLECIVFDLPHVVAGLQETENLRYVGGDMFKEIPPTDAILLKWILHDWNDDECMNILKKCKEAITRKGKGGKVIIIDIVMDTEKSDNESVETQLMLDMLMMVLVTGKERNKKEWVKLITSAGFSDYKITPVLGLRSLIEIYP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1193 357 Gene3D Vaccinia Virus protein VP39 107 357 IPR029063 -
Apr9g1193 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Apr9g1193 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 355 IPR029063 -
Apr9g1193 357 PANTHER ORCINOL O-METHYLTRANSFERASE 5 357 - -
Apr9g1193 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Apr9g1193 357 Pfam O-methyltransferase domain 130 339 IPR001077 GO:0008171
Apr9g1193 357 Gene3D - 1 106 IPR036388 -
Apr9g1193 357 PANTHER O-METHYLTRANSFERASE 5 357 IPR016461 GO:0008168
Apr9g1193 357 SUPERFAMILY "Winged helix" DNA-binding domain 11 111 IPR036390 -
Apr9g1193 357 CDD AdoMet_MTases 196 295 - -
Apr9g1193 357 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1193 Apr-Chr9 21450663 21454207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1193 30 343 Monolignol Biosynthesis Gene Families AT5G54160 31.975 4.11e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1193 - K16040 gmx:100807238 593.964