Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g1186 | ATGGCTTCATTTCTTAGCTTCTCAGAAATATCGTTGCCCAATAGAAACCAAAGCCTTGTGCAATACGTTTTGCCATCTCCAACAACTGGGGCATTTGCTGCTCAGAGTTTCAACTGGAAGAACAGTTCTGGCCAAAACCAGCGAATTGTGAAAGAAGAAGACAAAAGCTTCTCGAATTTCTCATTCCAAACCCAACCAGGACCTCCTGCTACATCCACAACAACATTTCAATCTTCAACCGTTTCAGTTCAAACACAACCACCACCACCATGGAGTTTTCAGGAAGCCACAAAACAGGATGGTTATTCTTCAGGGAAGGGTATGATGAAAACTGAAAACAATTCTTCCATGCAGAGTTTTTCTCCTGAGATAGCTAGTGTCCAAACTAACCATAACAATGGGTTTCAATCTGATTATGGCAACTACCCCCAACAATCTCAGACCTTAAGTAGAAGATCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAACAAGTTAAAGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCCAATTGTCCTACAAAGAAGAAAGTTGAGAGGTCTTTGGATGGACAAATCACTGAGATTGTTTACAAGGGTACTCACAACCATCCCAAGCCTCAGTCCACTAGGAGAAACTCATCATCTTCATCCTCTCTTGCAATCCCTCCTTCAAATCCCATCAGCACTGAAATTCCAGATCAATCATACGCTACTCATGGCAGTGGACAAATGGATTCAGCTGCCACCCCTGAGAACTCATCAATATCAATAGGGGATGATGATTTTGAGCACCAGAGTTCCCAAAAGTGTAAATCAGGAGGAGATGAGTTTGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTACGTCAGCGCCTGGAAGTAGAACAGTGAGAGAGCCAAGGGTTGTAGTTCAGACCACAAGTGACATTGATATTTTAGATGATGGGTACAGATGGAGAAAATACGGGCAGAAAGTAGTAAAGGGTAATCCAAATCCAAGGAGTTACTACAAGTGTACACACCCAGGATGTCCAGTGAGGAAGCATGTAGAAAGAGCCTCACATGACCTAAGGGCTGTTATCACAACCTATGAGGGAAAGCACAACCATGATGTCCCTGCAGCACGTGGCAGTGGTAACCATTCTGTCAATAGACCAATGCCAAACAATGCTGCAAACCCCACCAGTGCAGCCACGGCCATTAGACCCTCAGCAGTGACCCACCACACTAACAATTCTCTTCAGAGTCAAAGACCACAAGCACCACCAGAAGGGCAATCTCCCTTTGCTTTGGAGATGCTGCAGAGCCCAGGAAGCTTTGGATTCTCAGGGTTTGGGAATCCAATGGGATCTTACATGAATCAGCAACAACTATCTGACAATGTGTTCTCCAGAGCCAAGGAGGAGCCCAGAGATGACATGTTCCTTGAATCTTTGCTATGCTGA | 1485 | 0.4404 | MASFLSFSEISLPNRNQSLVQYVLPSPTTGAFAAQSFNWKNSSGQNQRIVKEEDKSFSNFSFQTQPGPPATSTTTFQSSTVSVQTQPPPPWSFQEATKQDGYSSGKGMMKTENNSSMQSFSPEIASVQTNHNNGFQSDYGNYPQQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRNSSSSSSLAIPPSNPISTEIPDQSYATHGSGQMDSAATPENSSISIGDDDFEHQSSQKCKSGGDEFDDDEPDAKRWKIEGENEGTSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGNHSVNRPMPNNAANPTSAATAIRPSAVTHHTNNSLQSQRPQAPPEGQSPFALEMLQSPGSFGFSGFGNPMGSYMNQQQLSDNVFSRAKEEPRDDMFLESLLC* | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g1186 | 494 | Pfam | WRKY DNA -binding domain | 154 | 210 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | Pfam | WRKY DNA -binding domain | 327 | 383 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | Gene3D | WRKY domain | 313 | 379 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 21 | 469 | IPR044810 | GO:0003700 | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 268 | 288 | - | - | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 395 | 436 | - | - | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 378 | 444 | - | - | |
Apr9g1186 | 494 | Gene3D | WRKY domain | 140 | 213 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | ProSiteProfiles | WRKY domain profile. | 154 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 208 | 267 | - | - | |
Apr9g1186 | 494 | SMART | WRKY_cls | 153 | 211 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | SMART | WRKY_cls | 326 | 385 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 128 | 157 | - | - | |
Apr9g1186 | 494 | SUPERFAMILY | WRKY DNA-binding domain | 318 | 386 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 203 | 288 | - | - | |
Apr9g1186 | 494 | PANTHER | WRKY TRANSCRIPTION FACTOR WRKY24-LIKE | 21 | 469 | - | - | |
Apr9g1186 | 494 | ProSiteProfiles | WRKY domain profile. | 321 | 386 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | SUPERFAMILY | WRKY DNA-binding domain | 152 | 212 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 128 | 153 | - | - | |
Apr9g1186 | 494 | MobiDBLite | consensus disorder prediction | 63 | 107 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g1186 | Apr-Chr9 | 21354654 | 21358006 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g1186 | 151 | 493 | WRKY Transcription Factor Family | AT2G38470 | 56.583 | 4.05e-117 | 352 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Apr9g1186 | WRKY | 1.3e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g1186 | K13424 | - | gmx:100127393 | 822.772 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g1848 | 10 | 31527195 | 31530726 | Apr9g1186 | 9 | 21354654 | 21358006 | PCT |