Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1178 ATGCTCATCCAAATTCGGAGATGGCTGCAGCAGCCAAATATATGGAGACTAGTTTGTTCTACTTCATCCGTTGTTGGACTACTGTGTTACGGTCTCAGCTCCTCCTTCACTCATCTGTTCGGAAAGTGGACCTTACTAAAGCTGTTTCTTTACACTGTTTTTAGTTTAATCATCTGCCTCACCATCCTGTTTGCAAAGGAATGGCAACACTCACCCAGTCTCCAACTAAAAGCTCACTTAGCATTTTTGGTTTTGATGACCACTTCTGTCTACTCCTTTTTCTTTGACAAAGTCCTGAGTGGGAAACCAGACGCATTTACCCTTATTTCATGTGCTGCTTTTGCCATTATGTCTCTCAGCTTGTCAAAGCAGACTCATTATGGAATCGAGGTTGATCTCTTATACTTCTTTAGCGGATGTCTAACAATTCAACTCATGAAAATAAATTTATTCCTGGTAATTGTTGGAGCCTGTTTCAGTTATTCACTCGTCATTCTTCGCTCCTCTTTGAATTCTCCAACAAATGACCGTCTTGGACTCCAAAATCACATAATCATTCAGGTGGATTCACATTCACTAGAAGCCAATACTAATTCCATCATGCAAGTAGAAGCCAACACCGATAGTGTTCCTATCACGAATTTAGTCACTAAAATGGATTCATCACACGGCAACACTGATAGAACTGTTGTCATGCAACAATTTATGACTTCCACAAAATCGCTTAAGAAGAAGAATCGGAAGCTTATTCACATAGTTTCCAAGCATGTGGAAAAATATCTTGAAGAGATTGTTGACTCTCAAAGATTGAACCATTTGCTACTGAACCCCGACGTCAACTTGGTGATGGACGCTCTTCCGTCGCAAACTATCAACGACCTTCACGAAGCAGTGAAGTTGATGCTGGAAGCAGGATTAGAGCAGGAGTGTTGTCACGTGTACAGCACATGCCCCAGGGAATTCTTAGAAGAATGTCTCTTGAGGTTTGGGTTAAGAGAGCTCAACATGGAGAACATCGACGAGATGGAGAAGATTGAAAATTGGACAAAAGCTTTCAACGTAGCTGTGAAGATTCTGTTTCCCAATGAAAGAAGACTTTGCGATCACGTCTTCAAAGGTTACTCTTCCGCAGCTGACATAACTTTCACTGAAGTTTGCAATGACTTGATAATTCATTTACTGAGTTTCCAATTCCTTCACAATTAAGACTAATCGTTGAATTTTTTGGGTCGCATCCTCCCTCAAGTGTGGAATACATTGCGTGGCATGTTTACAGAATTTGACTCACTATTTTGTGGTCAATACAGTGTATCACTCAGATTTAAATTAAGAACGGTTATGAAGATATTGAGGAAAGAAGGCTCGGGCTTTATTAGAGAGCTGAAGAATCATATTTCAAATGACTTGCCGCGATTGCTTGTTCCTGATGGTGGGCTTCATCCTATTACGTCTGAAACGATGAATTGCCTCACAAATTTTTGCAAATCTAGGGATATTATAACTCATAAGCATGTTTTGGAAGAGTACATGGTGAATCATGAGCGAGAGGAAAAGTCTTCTTTACTTTCTGTACAGATAAATTGGATTATAGAGCAGTTAGAGAGCAGTTTGGAAGCTAATTCCAAAAGCTACGTGGACCCTTCTTTGGGATATGTTTTTATGATGAACAACCGGGGCTATATGGTGGAAGTAGTGAAAAATAACCATCGATTGCAAGCCTTTGTGGGAAAAGATTGGATCCGGAGACTCACTGCAAAAGTTCAATTAAACTTGGAACATTATCAAAGAAGCTCGTGGGATAAGGTTCTAGAACTTTTGAAGGTGGAGCATAATGATGAGTTTGTGGTGCCTAATATTGTGGCAGAGTCAATGAAGGAAAAGCTCAGTTTGTTCAACCAGCACTTTGAGGAGATATGTAACATTCAGTGTAAATGGTTTATCTATGATGAACAATATAGGGAACAAATAAGAATGTCCCTTGAAAACATTTTGTTGCCGGGGTATGGGAATTTCATTAGGATGTTCCAGGTTGTTGTTGGCAAGGAAGCTGATGAGTATATTAAGTATGGAATGTTTCAGATTGTAGATAATCTCAAATGTTTGTTTCTTGGAAGCAAGGGGATGGAGCAGCGGCTGGAATTAAGAGAAGTAAAAGCTACTGAATCTGGTGTGAAAAAATGA 2181 0.3975 MLIQIRRWLQQPNIWRLVCSTSSVVGLLCYGLSSSFTHLFGKWTLLKLFLYTVFSLIICLTILFAKEWQHSPSLQLKAHLAFLVLMTTSVYSFFFDKVLSGKPDAFTLISCAAFAIMSLSLSKQTHYGIEVDLLYFFSGCLTIQLMKINLFLVIVGACFSYSLVILRSSLNSPTNDRLGLQNHIIIQVDSHSLEANTNSIMQVEANTDSVPITNLVTKMDSSHGNTDRTVVMQQFMTSTKSLKKKNRKLIHIVSKHVEKYLEEIVDSQRLNHLLLNPDVNLVMDALPSQTINDLHEAVKLMLEAGLEQECCHVYSTCPREFLEECLLRFGLRELNMENIDEMEKIENWTKAFNVAVKILFPNERRLCDHVFKGYSSAADITFTEVCNDLIIHLLSFQFLHN*D*SLNFLGRILPQVWNTLRGMFTEFDSLFCGQYSVSLRFKLRTVMKILRKEGSGFIRELKNHISNDLPRLLVPDGGLHPITSETMNCLTNFCKSRDIITHKHVLEEYMVNHEREEKSSLLSVQINWIIEQLESSLEANSKSYVDPSLGYVFMMNNRGYMVEVVKNNHRLQAFVGKDWIRRLTAKVQLNLEHYQRSSWDKVLELLKVEHNDEFVVPNIVAESMKEKLSLFNQHFEEICNIQCKWFIYDEQYREQIRMSLENILLPGYGNFIRMFQVVVGKEADEYIKYGMFQIVDNLKCLFLGSKGMEQRLELREVKATESGVKK* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1178 724 Gene3D Exocyst complex component Exo70 186 709 - -
Apr9g1178 724 PANTHER PROTEIN, PUTATIVE-RELATED 6 702 - -
Apr9g1178 724 Coils Coil 331 351 - -
Apr9g1178 724 Pfam Exo70 exocyst complex subunit 346 689 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr9g1178 724 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 702 IPR004140 GO:0000145|GO:0006887
Apr9g1178 724 SUPERFAMILY Cullin repeat-like 240 700 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1178 Apr-Chr9 21214688 21216870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1178 278 703 EXO70 exocyst subunit family AT5G58430 45.538 1.26e-112 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1178 - - aprc:113874433 1439.09