Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1173 ATGTCCATGCTCATCCAAATTCTGACATGGTTGATGCAGCCAAAGGTGTGGAGATTTGTGTGTTTTACTTCATCGGTTGTTGGGTTGCTCTGTTACGCACTGAGCTCTTTCAACCATTTATTCGGGAAATGGACTTGCTGGAAGATATTTCTTTACACCGTTTTCAGTTTCATCATTTGCATCTCAATCTTGTTCGCCAAGTCATGGCAACGCTCTGCTACTCTCCGGCTGAAAGCTCACATGGCGTTTTTGGTTTTGATCATCACTTCTGTGTACTCTTTTTTCTTCGACAAAGTCCTACAAGGAAAACCAGATGCATGTAGCCTCATTTCATGCGCAGCATTCGCTATCATGTCACTCACTTTGTCAAGACAGACTCACTGCGGATTCGAGATTGATCTTCTATATTTTTTCAGCGGAGGGCTAATCTTGCAACTCACGAAGATTAAATTATGGTTTATCATTGTTGGCGCCAGTTTCAGTTATTCCCTCATAATTCTTCGTTCTTTTTTGGATACTACTCCTGAAATTGGGCATCATCAACTCCGTATCCAAGATGAAGTAGTCATTCATGTAGATGATAGCGGTGGAGCCATTCATCGAGTGGATTCAGCCCAAGCAAATACTAGTAGTACTCAGAAAAGTAATCTTATCGTGCCACATGAAGTCAATAGGGATCTAGGATTCCAACAACCGTTTGCATCACATTCCCAATTAAACAACAGTGAGGGTGATATTATGAGGTCACAGCTAGTGGCTTGTTTAAAGGTGGTTAAGAAGCAGAATCAAAAGGGTATCCCCATGATTTCCAAGCGTGTCAAGGAGTACTTGAAAGCCAATGTTGACGAGAACCAGATTGGGATTTCACCGCGTCCCAATCTGAAATTGAAGAGTCTGTTAACACTTGGGTTCCAATTGCAAGAGCTCAACATTGAGAATTGGATCAAAGCGTCAAAAGTAGCTTTTAGGATACTCATTCCCATTGAAAAGAGACTCTGCCACTGCGTCTTCTTCCGTCTCTCTTCCGCTGCAGATATCTCTTTCACACAGGTTTCCAAGGAATTCACTATTCGTTTACTCAGTTTCGCAGATACCTTTGCCACATGCTGCATGGTACCCAAATTGTTCAACACATTGAGTTGCCTCATTCCAGACTTTGAATCTTTGTTTTCTGGTCAATACAGTGTGTCACTAAAAAATGAAGCACTCATGGTTTGGAAGAGACTGAGTGTAGCAAACAGGGCTATTTTTGTGGAATTGGAGAATTTTATTTGCCGTGAAATGCTGCAAACCGTTGTTCTTGAAGGTGGTCTTCATCCGGTTACCTATGAAGTCATGAATTGCCTTAGGGATGTTTGTGAATCTAAGGATATTGCCTATAAGCAGAGTTTTCAAGAACAATCCACCGATTTTGATAAAGAGGAAAAGTCTTCTTTGGTTTGTTTTCAGTTGGCTTGGATAATAGAGCTCTTAGAGAGTAATTTGGAAGCCAAGTCCAAAGAGTACAGGGATCCTGCTTTGGGCTGCGTTTTCATGATGAACAATCTTAGGTACATAGGAGTCAAAGCAAAAGAGGGGAAAATGAGAACCGTTTTGGACAAAGATTGGTTACCAAAAAACATGGCAAAAATCCAAAAAAATGTCGATCTCTATCAAAGAAGCTCATGGAATAGGGTGCTAGACATTTTGAAATTGGACGACAATGAATCGGGGGCACTTAATGAGATAGAAGAGTCAATGAAAGAGAAGCTCAAATTGTTCAACTTGCATTTTGAAGAGATATGTAATGTGCAGTCTACATGGTGGGTCTTTGATAATCAGCTAAGGGAACAGACAATACTATCTCTGGAGAACATCTTGTTGCCAGCATATGGAAACTTCATTGGGAGATTTCAAGATTTTCTTGGTAAGCATGCTTATGACTATATTCAGTATGGACTGTTGGACATTCAAGATCAACTCAACCATTTGTTTCTTGTAAATGAGACACTGAATCCGTTGCTGAAAGAGAACTAA 2016 0.4058 MSMLIQILTWLMQPKVWRFVCFTSSVVGLLCYALSSFNHLFGKWTCWKIFLYTVFSFIICISILFAKSWQRSATLRLKAHMAFLVLIITSVYSFFFDKVLQGKPDACSLISCAAFAIMSLTLSRQTHCGFEIDLLYFFSGGLILQLTKIKLWFIIVGASFSYSLIILRSFLDTTPEIGHHQLRIQDEVVIHVDDSGGAIHRVDSAQANTSSTQKSNLIVPHEVNRDLGFQQPFASHSQLNNSEGDIMRSQLVACLKVVKKQNQKGIPMISKRVKEYLKANVDENQIGISPRPNLKLKSLLTLGFQLQELNIENWIKASKVAFRILIPIEKRLCHCVFFRLSSAADISFTQVSKEFTIRLLSFADTFATCCMVPKLFNTLSCLIPDFESLFSGQYSVSLKNEALMVWKRLSVANRAIFVELENFICREMLQTVVLEGGLHPVTYEVMNCLRDVCESKDIAYKQSFQEQSTDFDKEEKSSLVCFQLAWIIELLESNLEAKSKEYRDPALGCVFMMNNLRYIGVKAKEGKMRTVLDKDWLPKNMAKIQKNVDLYQRSSWNRVLDILKLDDNESGALNEIEESMKEKLKLFNLHFEEICNVQSTWWVFDNQLREQTILSLENILLPAYGNFIGRFQDFLGKHAYDYIQYGLLDIQDQLNHLFLVNETLNPLLKEN* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1173 671 PANTHER PROTEIN, PUTATIVE-RELATED 8 660 - -
Apr9g1173 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 660 IPR004140 GO:0000145|GO:0006887
Apr9g1173 671 Pfam Exo70 exocyst complex subunit 312 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr9g1173 671 Gene3D Exocyst complex component Exo70 254 665 - -
Apr9g1173 671 SUPERFAMILY Cullin repeat-like 300 658 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1173 Apr-Chr9 21162017 21164159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1173 294 658 EXO70 exocyst subunit family AT5G58430 48.396 1.60e-105 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1173 - - aprc:113874430 1344.33