Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1170 ATGCTCAATCTCATCCAAAGTCTGAGATGGCTGATGCAGCCAAAGTTATGGAGATTTGTGTGCTTTGTTTCATCTGTTGTTGGACTCATCTGTTACCCTCTCAGTTCCTCTTTCCACCATTTATTTGGATACTGGAGATGGTGGAAGATATTACTTTATACTGTTTTCTGCTCCATCATATCTTTTGCAGTCTTATTTGCAAAGACACGAGAACGCTCAAGTACTCTGCGGGTGAAAGCTCATTTAGCATTCTTGGTTTTGATCATCACTTCTGTGTACTCATTTTTTTTCGATAAATTGTTCAAAGGAAAAACAGATGCATATGGTCTAGTTTCCTGCACTGCTTTCGCTATTATGTCCCTGGGTTTGTCAAGACAGACTCACTTTGGATTCGAAGTGGATCTCTTATATTTTTTCTGCGGAGCTGTGATAGTACAGTTGATGAAGATAAAGTTATGGTTAGTTACTGTTGGAGCAAGTTTCAGTTATTCCCTCATCATTGTTCGTTCTTCATTGGATGTCCCGTTGGGAAGAAGTGAGCATCTTGAGCTCCAAGGTGCTCAAGATCAAGTAGTCATTGAAGTTGATTTGCCTATTCAAGTCAATACTAGTACTGAAAATGACGATCTTGGATTCTTAGTTACTCAAGCTGATAATTCACAAGAAGGTAACAGGGATAAGGATAGTATCATGGCAAGGCTCATGAGTTGTATAGAGGCGCTAGAGAAAGAGAATGAGAACCTTATTAACATGCTTTCCGAACTTGTGAACCAATATATCAAAGGAAACCGAATTTCAGTGCTTCAGTTGCTTCCTGATTACGACGTAATGATGCATACGATGCCGTTGGGAATTATCAACGACCTTCACGAAACGGTGAAGCTAATGGTGGAAAGTGGGTTTGAGGAGGAGTGCTGCCACGTGTACAGCAGTTGCAGGAGGAAGTTTGTAGAAGAGTGTTTGTCTACAATGGGGTTGGAAGCACTCAACATGATGGACGTTGAGAATTGGATAACGGCTTGCAAGGTAACTTTGAGGACGCTGTTTCCCAACGAAAAGAGACTTTGCCATCGCGTGTTTATGGGGTTCTCTTCTGCTGCAGATATCTCTTTCAAAGAGGTTTGTGAAGAATTAACAATTTCTCTGCTGAGTTTCGGAGATGCTTTTGCAACTGGGATCCATTCGTCGAATCTTCTCTGCCACGTTATCCCCAGAGTGTTCAAGACATTGAGTAATCAGATACTAGAATACGAATTATTGTTTTCTGATCAGTGTAGTGTATCTCTCAGAAATGAAGCACTCAAGGCTTGGAAGAGATTGAGTGAAGCGAACGAGGGGATTTTCGTGATGCTAGAGAGTATTATTTGTGGTGATACAGTGAAAGCAATTGTTCATGGTGGTGGGGTGCACACGGTTACTTGCCAAGTGATGAACTGTCTTAGAGAAATTTGTGAAGCTAGGGATATTAACAGAAGAATTGAATACATTACTACTCCTAATAGAAAGGAGAACTCTTCTGTAATTTCGATCAAGTTTAATTGGATAATAGAGTTGTTAGAGAGCAATTTGGAAGCCACTTCCAAAAACTACACGGACATTGCTTTGGGCTATGTTTTCATGATGAATAATCTCAGGTATATAGAAGCAGAGGCTAAAAAGTGGAAAGCAAGAAACATTTTGGGCAAACATTGGTTCAGAAAACACGCTACAAAAGTCCGACAGAACTTTGAACTCTATCAAATAACCTCGTGGAACACGGTGCTGGAGTTTTTGAAACAGGACAAAGATGAGTCAGTGGCACCTAGTATCGTAGCAGAGTCAATGAAAGAGAAGATTAGTTTGTTCAACATGCACTTTGAGGAAATATGCAATGTTCAGTCTACATGGTCTGTGTTTGGTAGGCAACTAAGGGAACACATACGAATATCCCTAGAAAACGTCTTGCTGCCAGTATATGGTAATTTCATTGATAAGTTCCAGGATGCTTATGGTAAGCGTGCCTATGACTATATTGAGTATGGAATTTCGGACATTCAAGATCAACTCAACCGTTTGTTTCTTGTAATTCACCCCACTGTTCGTTCCTTGTAA 2091 0.4036 MLNLIQSLRWLMQPKLWRFVCFVSSVVGLICYPLSSSFHHLFGYWRWWKILLYTVFCSIISFAVLFAKTRERSSTLRVKAHLAFLVLIITSVYSFFFDKLFKGKTDAYGLVSCTAFAIMSLGLSRQTHFGFEVDLLYFFCGAVIVQLMKIKLWLVTVGASFSYSLIIVRSSLDVPLGRSEHLELQGAQDQVVIEVDLPIQVNTSTENDDLGFLVTQADNSQEGNRDKDSIMARLMSCIEALEKENENLINMLSELVNQYIKGNRISVLQLLPDYDVMMHTMPLGIINDLHETVKLMVESGFEEECCHVYSSCRRKFVEECLSTMGLEALNMMDVENWITACKVTLRTLFPNEKRLCHRVFMGFSSAADISFKEVCEELTISLLSFGDAFATGIHSSNLLCHVIPRVFKTLSNQILEYELLFSDQCSVSLRNEALKAWKRLSEANEGIFVMLESIICGDTVKAIVHGGGVHTVTCQVMNCLREICEARDINRRIEYITTPNRKENSSVISIKFNWIIELLESNLEATSKNYTDIALGYVFMMNNLRYIEAEAKKWKARNILGKHWFRKHATKVRQNFELYQITSWNTVLEFLKQDKDESVAPSIVAESMKEKISLFNMHFEEICNVQSTWSVFGRQLREHIRISLENVLLPVYGNFIDKFQDAYGKRAYDYIEYGISDIQDQLNRLFLVIHPTVRSL* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1170 696 SUPERFAMILY Cullin repeat-like 251 686 IPR016159 -
Apr9g1170 696 Gene3D Exocyst complex component Exo70 213 689 - -
Apr9g1170 696 PANTHER PROTEIN, PUTATIVE-RELATED 8 688 - -
Apr9g1170 696 Pfam Exo70 exocyst complex subunit 335 683 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr9g1170 696 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 688 IPR004140 GO:0000145|GO:0006887
Apr9g1170 696 Coils Coil 231 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1170 Apr-Chr9 21136287 21139011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1170 264 686 EXO70 exocyst subunit family AT5G58430 47.260 5.38e-125 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1170 - - aprc:113848415 681.404