Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1158 ATGGGATGCAGTTCATTTCTCAGAAGCCCCAAGAAAGAAGAACAAGAAGTCCCAGAAGCTATCACCTCCAAGTTACCCAATTGTAACCAACCTTACACTTACGAAGATTTCAACATTTTGGATGAACTTGAAGGGGTCTTCAACACGGAGGAAGAACAAAAGTTAGCACCACAAAAGCACTGTAGTGGTAAGTTTCATTGGGATTTCATGGAATGGGAAGAATTTCCCTACATTGGAGAGGAGGAAGCAGAAGATGACAATGAAGGGAAGGAGCACGTGATAGAGAACAGAAGACAATGCTTTTTTGAAGAACAACAAATAAAGAGAGAAAACATTGTTGGGTTTTGGGAAGTGGATGATGAGAAGATGATGGCTTTGAATTTGAACTTGAACTATCAAGATGTTTTGGATACATGGTCTGACCGAGGCTCTCTATGGGCTGATGAGTGTTCTCTTTCATTGGCTACCAATAATTGTCACTATATGGGAGAAGTGCCAGTATTGGAAGAAGAGAGAGCAAGAAGGGAAGCAAGTGTTCTTAGGTACAAAGAGAAGCGGCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGAAAGTTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 657 0.4079 MGCSSFLRSPKKEEQEVPEAITSKLPNCNQPYTYEDFNILDELEGVFNTEEEQKLAPQKHCSGKFHWDFMEWEEFPYIGEEEAEDDNEGKEHVIENRRQCFFEEQQIKRENIVGFWEVDDEKMMALNLNLNYQDVLDTWSDRGSLWADECSLSLATNNCHYMGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1158 218 PANTHER CCT MOTIF FAMILY PROTEIN 3 218 - -
Apr9g1158 218 MobiDBLite consensus disorder prediction 1 20 - -
Apr9g1158 218 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
Apr9g1158 218 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 218 - -
Apr9g1158 218 Pfam CCT motif 175 217 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1158 Apr-Chr9 21035898 21037525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1158 119 217 C2C2-CO-like Transcription Factor Family AT1G68520 44.068 1.32e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr9g1158 CCT 2.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1158 - - aprc:113847792 439.499