Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1155 ATGGAGAAGGTGGTGTGTGTGACAGGCGGTAGCGGGTGCATTGGTTCATGCCTGGTCCGTCTCCTACTGGATCGCGGCTACACCGTTCATGCCACCGTTCAAAATCTCAACGATGAAGTAGAGACGAAGCATCTAGAAGCCCTGGATGGAGCGTCGACCCGTCTCCGCCTCTTCCAGATCGATCTCCTTCACTATGATTCCATCGTCGCCGCCGTACGCGGCTGCGCTGGCGTCTTCCACCTCGCCTCTCCTTGCATCGTTGACCAAGTTCATGAGCCTCAGAAGGAGCTTCTGGACCCAGCGATTAAGGGAACAATGAATGTGCTCGCGGCCGCGAAGGAAGCAGGGGTGAAGCGCGTGGTGGTCACTTCCTCAATTTCTGCGATCATGCCGAGTCCCAATTGGCCTAGTGATGTTGTGAAGAGAGAGGAATGCTGGACTGATATTGAATACTGCAAGCAAAAGGGGTTGTGGTATCCGTTGTCCAAAACTTTGGCTGAGAAAGCTGCTTGGGATTTTGCTAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGAACTGTCATGGGTCCTGTTATTCCACCAAGACTTAATGCAAGCATGCTCATGCTTCTGCGTCTTCTTCAAGGCTGTACTGAAACATTTGAGGACTTCTTTATGGGGTTGGTTCACTTTAAAGATGTTGCATTGGCGCATATTTTGGTGTATGAGAACAAAGTAGCAGCTGGTAGGCATTTGTGTGCTGAAGCTATCTCTCACTATGGTGACTTTGTGGCAAAAGTTGCTGAACTTTATCCGGAATATAATGTGCCTCGGATGCAACGAGATACCCAGCCAGGATTGTTGAGAGCAAAGGATGGATCGAAGAAACTTATGGATTTGGGATTGGAATTCATTCCAATGGAGACAATCATCAAGGATGCTGTAGAGTGTTTGAAGAACAAAGGGTTCATTTCTTGA 963 0.4881 MEKVVCVTGGSGCIGSCLVRLLLDRGYTVHATVQNLNDEVETKHLEALDGASTRLRLFQIDLLHYDSIVAAVRGCAGVFHLASPCIVDQVHEPQKELLDPAIKGTMNVLAAAKEAGVKRVVVTSSISAIMPSPNWPSDVVKREECWTDIEYCKQKGLWYPLSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMLMLLRLLQGCTETFEDFFMGLVHFKDVALAHILVYENKVAAGRHLCAEAISHYGDFVAKVAELYPEYNVPRMQRDTQPGLLRAKDGSKKLMDLGLEFIPMETIIKDAVECLKNKGFIS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1155 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Apr9g1155 320 CDD FR_SDR_e 5 297 - -
Apr9g1155 320 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
Apr9g1155 320 Gene3D - 1 320 - -
Apr9g1155 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Apr9g1155 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1155 Apr-Chr9 20992102 20995728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1155 3 320 Monolignol Biosynthesis Gene Families AT5G58490 77.358 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1155 - - gmx:100803241 574.318