Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1150 ATGGCCGCAGCCTTAGAGTGCTGGTCAAGCCGCACCACCACCACCACCGGGGACGATGACATGGTAGAACAAGTCCTCATGAGGACCCACCATAGATCCGAGGGTACCTCTCCCAAAGACTCACCTTTCCCTGTCCACAAAAAGCTTCAGAAACTCACTCGTAACGTCTCTGAAGCCATTGCTTCCTTCAAAAACTCCCTTAACCTTGATTCTCCACCCTCTTCTTCTTCTTCTTCCAAAAACGATGCTTCTTCTCGGAAACTCGCTTGGGGCACCGTTGTTCGCAGCCTCACTCAGCTCTACCCTGGAAGCCAGCTTCCTGAGAAACTCATGTCCAACATTCGCAAACACTATGATTCATTGCCTCTCAGTTATGCACAGGCTGAGTTTGATATGAAAGATGTCTTTCTTCACATAAAGTTGATGGAGCAAGCTTCAGAGAGTGACCACCCTGCCATTTTGATTCAGGAGTGTGATGATGAAAATCGAGGGTCGGCGTTGAAGCTAACTTTTGCTTGCAACTCTACAATTTCGTGGCCTGCAATGTCTGGTGCGTTGAATAGTTCCTTCATTTGTTGCAAGAAGGTGCAGATCTTTGAGAAGAAAGGTTTTACCTTGGGGGTTATGCTTCTTGTTGTTCAGTTTGGGCATGATAAAATGTTGAGGACCAGGGTTGAAAACTCTTTGAAGTTCGCCATGAGGAAGCCCAAAACAAACGCTGTGAAGCTTCCCTTTGGGCTTTGTGGGTGCCACGAAGAGAATTCCAAGGGGAGAGAACTTGTGGAGATTGAAGAAGATGCTGGTGATGCTTACCGTGGAAGGGAGTTTGAGAATTCAAGCCCAAAGGTTCAGCTTCAGTTGCCCTTGCCTTCTTCATCTTTTGTTGTATCTGTGGATGAATGGCAGACAATAAAGTCAGGTGGGGATGAGATTGAGAAATGGTTGTTGAACTCAGATAGTGTTGAGTTCGTTGAACAGATTGGACCCAGTTCTTATAAAGGGGTATATATGGGGAAAAGGGTTGGGATTGGGAAGCTGAAAGGGTGTGATAAGGGAAACTCTTACGAGTTTGAGCTCCACAAGGATCTGCTAGAACTGATGACTTGTGGTCATAGAAACATTCTTCAGTTCGGTGGCATTTGTGTGGATGATAATCACGGGTTGTGTGTGGTGACTAAATTCATGGATGGTGGGTCTGTTCATGACTTATTGTTGAAGAACAAGAAGCTTCAGACTAAGGATATTTTGAGAATTGCAGTTGATGTAGCTGAGGGGATCAAGTTCATGAATGACCATGGTGTTGCATATAGAGACCTTAATACACAGAGGATTCTGTTGGATAGGCATGGGAATGCTTGTTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTTGCTCCAGAGATAATTGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAATGTTTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAAGCTGCTTATTCTTCATTTTCACCGGTGCAAGCAGCAGTTGGAATTGCTGCATGTGGCCTTAGACCTGAAATTCCCAAAGATTGCCATCAAAATCTAAAATATATTATGACAAAGTGCTGGAACAACACCCCTTCAAAACGTCCTCACTTCTCTGAAATTTTAGCTATATTGTTGCGACCAAACAACAATAGATAA 1737 0.4456 MAAALECWSSRTTTTTGDDDMVEQVLMRTHHRSEGTSPKDSPFPVHKKLQKLTRNVSEAIASFKNSLNLDSPPSSSSSSKNDASSRKLAWGTVVRSLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESDHPAILIQECDDENRGSALKLTFACNSTISWPAMSGALNSSFICCKKVQIFEKKGFTLGVMLLVVQFGHDKMLRTRVENSLKFAMRKPKTNAVKLPFGLCGCHEENSKGRELVEIEEDAGDAYRGREFENSSPKVQLQLPLPSSSFVVSVDEWQTIKSGGDEIEKWLLNSDSVEFVEQIGPSSYKGVYMGKRVGIGKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFGGICVDDNHGLCVVTKFMDGGSVHDLLLKNKKLQTKDILRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCHQNLKYIMTKCWNNTPSKRPHFSEILAILLRPNNNR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1150 578 Pfam Protein tyrosine and serine/threonine kinase 356 570 IPR001245 GO:0004672|GO:0006468
Apr9g1150 578 Gene3D Transferase(Phosphotransferase) domain 1 314 575 - -
Apr9g1150 578 PANTHER SERINE-THREONINE PROTEIN KINASE 1 575 - -
Apr9g1150 578 ProSiteProfiles Protein kinase domain profile. 321 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1150 578 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 575 - -
Apr9g1150 578 SUPERFAMILY Protein kinase-like (PK-like) 301 571 IPR011009 -
Apr9g1150 578 PRINTS Tyrosine kinase catalytic domain signature 392 405 IPR001245 GO:0004672|GO:0006468
Apr9g1150 578 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Apr9g1150 578 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Apr9g1150 578 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1150 Apr-Chr9 20926890 20931458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1150 304 571 MAP Kinase Kinase Kinase AT2G17700 34.909 1.59e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Apr9g1150 PK_Tyr_Ser-Thr 9.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1150 - - pvu:PHAVU_008G258400g 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1824 10 31325055 31328925 Apr9g1150 9 20926890 20931458 PCT