Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1147 ATGCCAGAAGCGTGCACATCATTCCCTCCGTTAACGGTGTTGTTGCTGGTGGTGTTGACTCTGTTTCCATTAGGTCAAAAGCAGAGTCTCTGTTTGACGCTGAACAGCGAAGGCTTGGCGCTGCTAGCGTTGAGGGAGAGGGTAGTGAAGGACCCTTTCGGGGCATTAGCAAGCTGGAATGGCGAAGGCATTGATCCATGCTCGTGGTTCGGGGTTGAGTGTTCCCATGGCAATGTTGTCAGACTGAATTTAAAAGACCTTTATCTTGAAGGAACACTAGCACCAGAAATTGGCAAGCTGGCTCACATAAAATCAATCATTTTGCGCAACAATTCTTTCTTTGGAGAAATTCCAAAGGAGATATTACATTTAGAGAAGTTGGAAGTTCTTGATTTTGGATACAATAATTTTACTGGACCACTTCCATTTGACCTTGGCAGTATTCCATCACTCACAACCCTTTTATTGGATAACAATGACTATATAGGTAACTTATCTCCAGAACGGTATAAGCTCAAGATGATTTCTGAATTGGATGTTAATGAAGAACAACTGACTGGTGCCACCACTAGAGAAGCATTTGTTGGAAGATGTAATTTATGTCACATTGGCCAAGATGGGGATAGAGCATACAGGAGGCAACTTCTCAAGGTAACAAATGCAGCTAATACACTCAGAATCCAAAGGGATGATAACCAAGAGATACTTAAACAATCACCATCACGTTTTCCCTCTTCATTATCACCAAATTCTGAGCCTTTCTCACCAACACAATTTTCATCATCAGAAAGCCCCTCAAATTTACCATCAACATCAGCTTCAGTTTCATATTCACCATCACCATCTCATTCCAGTATTTTTTTCACTCCTTCTCCTTCATCGATAGTGTTACCAAGTCCAGATATAACCCCCCCAGCTAACCCACCTACCATTGTGTCTACACCTCCACAGTTTAACTGGGCTTCAGCACCTTCCCCTTCTCCATTTTCTAACGAAGGGAATACAAAACGTTTCAATCTGATGCATCATTCTGTGATAATATGGTCTACAGTTGGGTGCTTCTCCTTATTGATTTTGGTGTTAGCCATTACTCTTACGTGCTTCCAAAGTAGGAAGGTTGTGACTGTTAAACCTTGGTCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCTTTTGTAACAGGTGTGCCAAATCTCAAAAGAGCAGAACTTGAAGTAGCTTGTGAATATTTCAGCAACATCATTGGTTCTCTGCCAGATGGAACTATGTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCAGTGACCACATCTCAAAACTGGTCAAAATGTATGGAAGCTCAATTTCGAAAGAAGATTGCAACATTATCCAGAGTGAACCACAAGAATTTTGTGAATCTTATTGGGTACTGTGAAGAGAATAAACCATTCACAAGAATGATGGTTTTTGAGTACGCTTCAAATGGAACGCTCTGTGAGCATCTACACCTTAGAGAAGCAGAAGAACTAGACTGGAGAATGAGAATGAGAATGAGGATAGCTATGGGAATAGCGTACTGCCTAGAGCATATGCATGAGCTGAAGCCACCCATTGTCCACAAAAACCTGCAATCTTCCTCTATATACCTAACTGAAGATTATGCTGCTAAAATTTCAGATCTTAGTTTCTGGAATGACATAGTTGCTATAAGGAAGGGGCCTGCAACCGCACAACTCTTGGAAACACCATCAGCACATATAGAGGACAATGTCTATAGCTTTGGGATAATATTATTTGAGTTAGTAACAGGAAAAATTCCCCATGCTATAGACAATGGCCTTTTGGCAGATTGGGCAGCAGAATATGTATGGAGAGGAAAACCCTTAAGAGATGTTGTGGATCCAGGACTGAACTGCTTACAAGAAGAAGAGATTGAGGAATGGTCTGAAATGATAAGAAATTGTGTACATCCAGATCCAGAAAAAAGGCCAACTATGAAAGAAGTTACAGCTAGGCTTAAGGAAATCACAGCTATGGGGCCTGATGGAGCAAATCCAAAATCATCACCACTTTGGTGGGCAGAAATGGCAATTACGTCCATTGATTCAAGTTGA 2103 0.4165 MPEACTSFPPLTVLLLVVLTLFPLGQKQSLCLTLNSEGLALLALRERVVKDPFGALASWNGEGIDPCSWFGVECSHGNVVRLNLKDLYLEGTLAPEIGKLAHIKSIILRNNSFFGEIPKEILHLEKLEVLDFGYNNFTGPLPFDLGSIPSLTTLLLDNNDYIGNLSPERYKLKMISELDVNEEQLTGATTREAFVGRCNLCHIGQDGDRAYRRQLLKVTNAANTLRIQRDDNQEILKQSPSRFPSSLSPNSEPFSPTQFSSSESPSNLPSTSASVSYSPSPSHSSIFFTPSPSSIVLPSPDITPPANPPTIVSTPPQFNWASAPSPSPFSNEGNTKRFNLMHHSVIIWSTVGCFSLLILVLAITLTCFQSRKVVTVKPWSTGLSGQLQKAFVTGVPNLKRAELEVACEYFSNIIGSLPDGTMYKGTLSSGVEIAVASVTTSQNWSKCMEAQFRKKIATLSRVNHKNFVNLIGYCEENKPFTRMMVFEYASNGTLCEHLHLREAEELDWRMRMRMRIAMGIAYCLEHMHELKPPIVHKNLQSSSIYLTEDYAAKISDLSFWNDIVAIRKGPATAQLLETPSAHIEDNVYSFGIILFELVTGKIPHAIDNGLLADWAAEYVWRGKPLRDVVDPGLNCLQEEEIEEWSEMIRNCVHPDPEKRPTMKEVTARLKEITAMGPDGANPKSSPLWWAEMAITSIDSS* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1147 700 MobiDBLite consensus disorder prediction 298 312 - -
Apr9g1147 700 Gene3D Phosphorylase Kinase; domain 1 375 488 - -
Apr9g1147 700 MobiDBLite consensus disorder prediction 298 317 - -
Apr9g1147 700 PANTHER PROTEIN MALE DISCOVERER 2 13 698 - -
Apr9g1147 700 ProSiteProfiles Protein kinase domain profile. 408 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1147 700 Gene3D Ribonuclease Inhibitor 33 234 IPR032675 -
Apr9g1147 700 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Apr9g1147 700 Gene3D Transferase(Phosphotransferase) domain 1 489 678 - -
Apr9g1147 700 MobiDBLite consensus disorder prediction 239 275 - -
Apr9g1147 700 Pfam Protein tyrosine and serine/threonine kinase 414 669 IPR001245 GO:0004672|GO:0006468
Apr9g1147 700 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 13 698 - -
Apr9g1147 700 SUPERFAMILY Protein kinase-like (PK-like) 395 669 IPR011009 -
Apr9g1147 700 SUPERFAMILY L domain-like 34 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1147 Apr-Chr9 20883197 20888505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1147 344 669 Receptor kinase-like Gene Family AT3G58690 27.731 6.76e-36 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr9g1147 PK_Tyr_Ser-Thr 5.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1147 - - gmx:100779427 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1819 10 31275966 31281218 Apr9g1147 9 20883197 20888505 PCT