Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1138 ATGGCTTCGTGGGTTAGAGGCAAGTGCATCGGTAAGGGCGCGTTTGGCATCGTAAACATAGCGGTTTCTAAAAAAGACGGTCGCGTTTTCGCGGTGAAGTCCGTGGATCGCAAAACGGGGCTCACGGTTCAGCTCGACGCGTTGGAGAACGAGATTCGGATACTTCAGCGCGTGTCTTCGCCTCACGTGGTGGCGTTTCTAGGCGCCGACGTCACGTGCGAGGAGGGCGCAACGTCGTCGTTCCGGAATCTTCACTTGGAGTACATGCCAGGTGGCACCGTCGCTGACCTGGACCATGCTGACGTGGACGAACGATTGGTTAGACGCTACGCTTGGTGTCTCGTGAGCGCCCTGCGACACGTTCACGCGCGCGGTTTCGTGCACTGCGACGTTAAAGGGAGGAACGTGCTCGTCGCCGGCGACCGCTCCGTTGCCAAGCTCGCTGACTTCGGCGCCGCGGTCGATTTCTCCGGCGAGGCCTCTCCGCGCGGAAGCCCGATGTGGATGGCGCCGGAGGTAATTCGCCGGGAGTATCAGGGACCGGAATCCGACGTGTGGTCGCTTGGATGCACGGTGATCGAGATGGTTACCGGAAAACCGGCGTGGGAGGATCGCGGCGTCGACACGCTGAGTCGAATCGGCTACTCGAACGAGTTACCGGAGTTTCCGAGCGTGTTATCGGAGGTAGGTCGTGATTTTCTCGAGAAGTGTCTAAGAAGGGAACCGAATAAACGGTGGAGCTGTGATCAGCTGCTGCAGCATCCATTTTTACTTCCCTACAACTACTCTGTGGAATCGTCGCCTCGGTGCGTTTTGGACTGGGTTGACTCGGAGTTCGCGGAGTCAGATAACGAGTGTGAGCAAGAAGAAGAAAAGATGATACCGAATTCGAAACTGAACAGTGAAGAAGATTCGGTAAATAACAGGATATGTAAATTAGCGACGGGGTCAAGGGTAAATTGGGAAACACAGGGTTGGGTAGTGGTGAGGGCAATTGCGTCCCACGCGGAACCAACAACCGCAGGAGCGTGTGATGGTGTAAATTCGGACGACGGAGAAAGGGTAAATGGCGAATTTCGCGTTGTAGTGAGGGTAGAAGAGGCAATGGAGGTAGGGACTAGTTTGGAATATTGGAATTGGGGAAAATATGAAATAATTAGAAATGACACGGTAAATCGGGAAATGTGGAAGTTTGGTGGGAGGGAGAGGTTGGTGTGGCGGCGTGAGTGTGATGAGTGTAACCGCAACCGCAAGAGTTTCACAGCTGGAAGGGGTTGTCGGTATAGTTTTGGGTGGGAAAAGTTGGGTAGGATAATAGGAATATTCAGCATTTACAGCTTGTGTTGTAAAATTTTTTATGTCATGTTTCTTATTCTTAATATATTATGCTTTTCTATTACTTATGTTGTTTACCTTTTACTGCATGTGATTACTGAAAAGGGGCCTCTGTGTCAACGGCAAAATAATATTAAGAAGATAACAATAATAATAAAGAATTAA 1500 0.51 MASWVRGKCIGKGAFGIVNIAVSKKDGRVFAVKSVDRKTGLTVQLDALENEIRILQRVSSPHVVAFLGADVTCEEGATSSFRNLHLEYMPGGTVADLDHADVDERLVRRYAWCLVSALRHVHARGFVHCDVKGRNVLVAGDRSVAKLADFGAAVDFSGEASPRGSPMWMAPEVIRREYQGPESDVWSLGCTVIEMVTGKPAWEDRGVDTLSRIGYSNELPEFPSVLSEVGRDFLEKCLRREPNKRWSCDQLLQHPFLLPYNYSVESSPRCVLDWVDSEFAESDNECEQEEEKMIPNSKLNSEEDSVNNRICKLATGSRVNWETQGWVVVRAIASHAEPTTAGACDGVNSDDGERVNGEFRVVVRVEEAMEVGTSLEYWNWGKYEIIRNDTVNREMWKFGGRERLVWRRECDECNRNRKSFTAGRGCRYSFGWEKLGRIIGIFSIYSLCCKIFYVMFLILNILCFSITYVVYLLLHVITEKGPLCQRQNNIKKITIIIKN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1138 499 Gene3D Transferase(Phosphotransferase) domain 1 2 327 - -
Apr9g1138 499 SUPERFAMILY Protein kinase-like (PK-like) 4 300 IPR011009 -
Apr9g1138 499 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Apr9g1138 499 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 353 - -
Apr9g1138 499 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1138 499 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1138 499 CDD STKc_MAPKKK 3 257 - -
Apr9g1138 499 Coils Coil 38 58 - -
Apr9g1138 499 Pfam Protein kinase domain 6 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1138 499 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 2 353 - -
Apr9g1138 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1138 Apr-Chr9 20767060 20768603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1138 4 340 MAP Kinase Kinase Kinase AT1G07150 58.551 5.09e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr9g1138 Pkinase 1.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1138 - - gmx:100776227 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1806 10 31113726 31115309 Apr9g1138 9 20767060 20768603 PCT