Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1137 ATGTCTTGCTCCGTCGCAGTTTCAAACTCGCCGGTGTTTTCTCCTTCTTCTTCCCTCTTCTGCACCAAGCCTTCCATCATCTCTTCTTCACCGGAATCTCTTTCCCTCTCTCTCTCTCATCTCAAACCCTCCAACTCTTCTACGGCGTCGTCTTGCTCCTCCCCTTCTTCTTCTTCTTCCCCTTCCTCTCCCTTTCGCCTTCGCCTTCCTAAGCCCTCCACCTCCCCAAACGCCACCGTTTTGAAGAGGAAGAGACCTGCTAGGCTTGACATACCTGTTTCTTCTCTCACCTTTGGGGTTCCTCCCACGCCCTCCGCGGCGGCGCGTGATGTCGTCGAGGCTGAGGGAGATGGGTTTTCTGTGTATTGCAAAAGGGGAAGGAGGGAGTACATGGAGGATCGTTACACCGCCGGGGATAATCTACGCGGAGACCACAAATTGGCTTTTTTCGGCATATTTGATGGACATGGAGGTGCAAAAGCTGCTGAATTTGCTGCGAATAAGTTAGAAAAGAATGTCTTGGATGAAGTGATTTTGAGAGATGAAGACGATGTTGAGGAGGCAGTGAAGCGGGGTTACCTCAACACGGATTCAGATTTCTTGAAAGAGGATCTCCATGGTGGCTCTTGCATTGTAACAGCATTGATTAGGAACGGTAACCTAGTTGTGTCCAACGCCGGCGATTGCCGTGCTGTCATCAGCAGAGGAGGTGTTGCCGAGGCCCTAACCTCTGATCACCGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACCCTGGGTGGCTATGTTGATCTATGCCGCGGAGTTTGGAGGGTCCAGGGATCTCTGGCTGTATCTAGGGGAATCGGAGATCGACACCTGAAGCAATGGGTGACAGCTGAACCTGAGACCAAAGTTCTCAGAATCGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTAGATATTGCTCGTCCTTTTTGTGTAGGAACCAACAAACCTCAACCATTGCTAGCTTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACAAGTGTAATGCTAATCAAATTGGAGCACTATATTTGA 1122 0.4875 MSCSVAVSNSPVFSPSSSLFCTKPSIISSSPESLSLSLSHLKPSNSSTASSCSSPSSSSSPSSPFRLRLPKPSTSPNATVLKRKRPARLDIPVSSLTFGVPPTPSAAARDVVEAEGDGFSVYCKRGRREYMEDRYTAGDNLRGDHKLAFFGIFDGHGGAKAAEFAANKLEKNVLDEVILRDEDDVEEAVKRGYLNTDSDFLKEDLHGGSCIVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETLGGYVDLCRGVWRVQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARPFCVGTNKPQPLLACKKLVDLSVSRGSMDDTSVMLIKLEHYI* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1137 373 Pfam Protein phosphatase 2C 119 361 IPR001932 -
Apr9g1137 373 MobiDBLite consensus disorder prediction 37 78 - -
Apr9g1137 373 CDD PP2Cc 118 369 IPR001932 -
Apr9g1137 373 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Apr9g1137 373 ProSiteProfiles PPM-type phosphatase domain profile. 118 369 IPR001932 -
Apr9g1137 373 SMART PP2C_4 111 367 IPR001932 -
Apr9g1137 373 Gene3D - 118 372 IPR036457 -
Apr9g1137 373 SUPERFAMILY PP2C-like 119 370 IPR036457 -
Apr9g1137 373 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 372 - -
Apr9g1137 373 PANTHER PROTEIN PHOSPHATASE 2C 3 372 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1137 Apr-Chr9 20756957 20759726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1137 1 373 PP2C-type Phosphatase Gene Family AT2G30020 65.163 2.72e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1137 K17506 - gmx:100797934 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1805 10 31107464 31109135 Apr9g1137 9 20756957 20759726 PCT