Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1116 ATGCACATGAACACCTACTCACAAGCCACCACATCAAGATCAATGTCACTGCCACCCACTTTGGATGAAGACTTGGAGAACAACATGGAGGTTTGTGATAGTACTAATGTGAAGAACTCCATGGTTAGAAAGAAGTCAGATATAGTTTTGGTCACAAATAACGCTCGTTTTCAAATGCTTAGAGATTTGATGACCAATTTTCGAGAGGTCTTCTTTGGCACTAAACTTGTGGTGCTTTTTCCGGCAGTCCCTTTAGCTGTTGTTGCAAATTTTTATAGCTTTGGAAGGCCTTGGATATTTGCTTTCAGCCTGCTTGGACTTGCTCCCCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATACTTCACTGGCCCAACAGTTGGGGGGCTACTGAATGCAACCTGTGGAAATGCAACGGAGATGATAATAGCATTATTAGCACTTCACAAGAACAAAGTAAATGTTGTCAAGTTGTCCCTACTCGGTTCCATTCTCTCAAACCTTCTCTTAGTTCTTGGAAGTTCACTTCTCTGTGGTGGCTTAGCCAATCTTAAGAGAGAGCAGAGATATGAGAGAAAACAGGCTGATGTAAACTCGCTGCTTCTGTTACTGGGGTTGCTATGCCATTTGCTGCCATTGCTGTTCAAATACGCGTTAGGAGGGGGCACTTATTCTATAGCCACAAGCACTCTTCAGCTGTCAAGAGCAAGCAGCGTTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTTCAATTAAAAACTCATCGAAAATTGTTTGATGCACAAGAGGAGGACGACGATGAAGAGAAAGCCGTGATTGGATTTTGGAGTGCATTTTCCTGGTTGGTGGGTATGACATTGGTCATATCTCTACTTTCTGAATATGTTGTGGCAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTCAGCTTCATTAGCATTATTTTGCTACCAATTGTTGGGAATGCTGCAGAACATGCCGGTTCAATCATATTTGCTTATAAGAATAAGTTGGACATATCTTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGCATACGAATGGATCTGGACTTCAATCTTCTTGAAACTGGATGTCTTGCCTTTACAATTATAATTACAGCGTTCACTTTACAAGATGGAACTTCACACTACATGAAAGGAGTGATTCTTTTTCTATGTTACATTGTCATTGGTGCGTGCTTTTTTGTTCTCAAAACTCCACTAACCGACCAATATCCTAAGATTAACTTCGGAGCTGAACCATCCTTTGAAGCCATCACCACTTGA 1353 0.4146 MHMNTYSQATTSRSMSLPPTLDEDLENNMEVCDSTNVKNSMVRKKSDIVLVTNNARFQMLRDLMTNFREVFFGTKLVVLFPAVPLAVVANFYSFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHKNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYERKQADVNSLLLLLGLLCHLLPLLFKYALGGGTYSIATSTLQLSRASSVVMLLAYVAYIFFQLKTHRKLFDAQEEDDDEEKAVIGFWSAFSWLVGMTLVISLLSEYVVATIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFNLLETGCLAFTIIITAFTLQDGTSHYMKGVILFLCYIVIGACFFVLKTPLTDQYPKINFGAEPSFEAITT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1116 450 Gene3D - 127 275 IPR044880 -
Apr9g1116 450 Gene3D - 276 424 IPR044880 -
Apr9g1116 450 TIGRFAM caca2: calcium/proton exchanger 62 424 - -
Apr9g1116 450 TIGRFAM cax: calcium/proton exchanger 81 424 IPR004798 GO:0006816|GO:0015369
Apr9g1116 450 Pfam Sodium/calcium exchanger protein 281 419 IPR004837 GO:0016021|GO:0055085
Apr9g1116 450 Pfam Sodium/calcium exchanger protein 98 255 IPR004837 GO:0016021|GO:0055085
Apr9g1116 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 27 434 - -
Apr9g1116 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 27 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1116 Apr-Chr9 20525878 20530300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1116 36 432 Antiporters AT2G38170 66.667 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1116 K07300 - gmx:100802344 731.095