Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1088 ATGAAGAAAACACCACCCCCAAATTTGCATCAATCTAGCCAAAGAAAGCACAATGCTAATCTCCAGCTCCAGCATCTTGGTAGCCAAAGACAACACAATCCTAAGACTAATTCAGCTCTGAAATCTTTCAAGCATGCTGTCAAGAAATGTGCAGCTGCTTTTTCATTGATTCTCTCTGGCAAAAGAAAAACAGCCTCAAATGTTGTTGCAAGTGTTAATAGTAAGAATACATCCAAAGTCAGAGGGGTGGTATCATCTTCAACTGATTTATCATCTGAGAGTAACACCAAGAATTCATCAAAATGGAAGTTTTCTTATTCCTATGCATCATCTAGTACTGCAAGTGGACAACTTGGAATTGGGAGCTTCTCCTTTGAGGAAATTTACAAGTCAACTGCAAAATTCTCTCAAGATAATCAAATTGGAGAAGGTGGCTTTGGAACAGTCTATAAGGGAAAGCTTAATGATGGATCTCTTGTCGCCGTGAAGCGTGCCAAAAAGGAAGTAATACACAATCACTTACATGAGTTCAAGAATGAGATATACACCTTATCACAGATTGAGCACAGGAATCTTGTAAGGCTATATGGATATTTGGAGCATGAAGATGAGAAGATTATTGTCGTTGAATACGTTGGTAACGGTACACTTCGAGAACATCTCGATGGTATTCGAGGAGATGGACTAGAAATTGGTGAGCGTCTAGATGTAGCAATTGATGTGGCTCATGCAATAACCTACCTTCATATGTACACAAATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATCCTAATCACTGAGAATCTAAGGGCCAAAGTGGCAGATTTTGGTTTTGCTAGGTTGTCTGATGATCCTACTGCAACCCATATTTCAACTCAAGTTAAAGGAACTGCTGGATATATGGATCCTGAGTACCTTAAAACATATCAACTCACTGAAAAGAGTGATGTTTATTCCTTTGGTATACTGCTTGTGGAAATGATGACAGGACGACATCCAATAGAACCAAAGAGACCCCTTGATGAGAGAGTGACAATCAGATGGGCAATGAAGATGTTGAAACGAGGGGATGCTGTATTTGCCATGGACCCAAGACTGAGAAGAAATCCAGCCTCCATAAAGGCAGTGAAAAAGGTTCTCAAGCTAGCTCTACTATGCGTTGCACCTTTGAGACAATCACGGCCACCTATGAAGAATTGTGCAGAGGTTCTTTGGGACATTCGTAAAAGTTTTAAGGATGAATCCATGTCTGATCCTCCTTCTCTTCCTTCTCACCATTCTGCAGATTTTCCTCAAAGAGAAAAGAATAAGAATATGTTGTTTGGTATTAAAGATGATGACAGCTATAAATTTGTCTCAGTACCTAATCACATTCATTCATAA 1392 0.393 MKKTPPPNLHQSSQRKHNANLQLQHLGSQRQHNPKTNSALKSFKHAVKKCAAAFSLILSGKRKTASNVVASVNSKNTSKVRGVVSSSTDLSSESNTKNSSKWKFSYSYASSSTASGQLGIGSFSFEEIYKSTAKFSQDNQIGEGGFGTVYKGKLNDGSLVAVKRAKKEVIHNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHEDEKIIVVEYVGNGTLREHLDGIRGDGLEIGERLDVAIDVAHAITYLHMYTNNPIIHRDIKASNILITENLRAKVADFGFARLSDDPTATHISTQVKGTAGYMDPEYLKTYQLTEKSDVYSFGILLVEMMTGRHPIEPKRPLDERVTIRWAMKMLKRGDAVFAMDPRLRRNPASIKAVKKVLKLALLCVAPLRQSRPPMKNCAEVLWDIRKSFKDESMSDPPSLPSHHSADFPQREKNKNMLFGIKDDDSYKFVSVPNHIHS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1088 463 SMART serkin_6 135 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1088 463 CDD STKc_IRAK 141 407 - -
Apr9g1088 463 ProSiteProfiles Protein kinase domain profile. 135 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g1088 463 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Apr9g1088 463 PANTHER OS02G0821400 PROTEIN 1 443 - -
Apr9g1088 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Apr9g1088 463 Gene3D Transferase(Phosphotransferase) domain 1 212 424 - -
Apr9g1088 463 SUPERFAMILY Protein kinase-like (PK-like) 116 409 IPR011009 -
Apr9g1088 463 PANTHER OS01G0253100 PROTEIN 1 443 IPR045271 GO:0004714|GO:0006468
Apr9g1088 463 MobiDBLite consensus disorder prediction 418 437 - -
Apr9g1088 463 Gene3D Phosphorylase Kinase; domain 1 93 211 - -
Apr9g1088 463 Pfam Protein tyrosine and serine/threonine kinase 137 406 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1088 Apr-Chr9 20318633 20322271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1088 107 400 Receptor kinase-like Gene Family AT1G79620 44.186 4.98e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Apr9g1088 PK_Tyr_Ser-Thr 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1088 - - gmx:100811511 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1088 9 20318633 20322271 Apr2g0082 2 1275557 1280131 PCT