Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr9g1082 | ATGGGAGAGGGAGAGAACTTGGAAGTAGAAACAGAGACAGAAACAGAAGCAGAAGGAACATCAACATGGAACCTCGGAAAACATAGGCAGATACTGGAGTTATCGGAGAAGCTCATGAATGGAAACCTCAACACAAAGATTGAAGCTGCCAGAGAAATCAGGAAGCTCGTTCGCAAATCATCGTCATCATCCAAAACACGTTTGAAACTTGCCGCCGCGGGTGTGATTCAACCACTCGTCTTCATGCTCTCTTCTTCCGACCTCGACGCTCGTCAATCCTCTCTCCTCGCTCTTCTCAACCTCGCTGTTCGCAATGAACGAAACAAAGTCAAAATAGTGACAGCTGGTGCCATGCCTCCTCTGGTGGAGCTCCTTAAGATGCAAAATAGTAGTATAAGAGAATTAGCTACAGCTGCAATCTTGACACTCTCAGCTGCTGCACCCAACAAGCCAATTATTGCTACTTCTGGAGCTGCACCTCTCCTTGTTCAGACTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGACGCCGTTACAGCCCTCCATAATCTTTCCACTAGCATTGGGAATTCCACTGAACTTCTTGATGCAAGTGCTGTTTTCCCTCTGATCAACCTCCTTAAAGAGTGCAAGAAGTATTCTAAGTTTGCAGAAAAAGCCACAGCACTACTTGAAATCCTTTCCAACTCTGAAGAGGGACGAAATGCAATCACAATTGCTGATGGTGGAATCTTAACCCTAGTAGAGACAGTTGAAGATGGATCCCTAGTCAGCACAGAGCATGCTGTTGGAACTTTGCTATCATTATGTCTAAGCTGCCGAGATAAGTACCGGGAACTGATTCTTAAAGAAGGAGCAATTCCAGGTCTGTTACGACTAACAGTGGAGGGCACAGCTGAAGCTCAAGATAGAGCACGCACGCTTCTGGATTTGCTCAGAGATTCTCCCCCTGAAAAAAGACTAACCTCCTCAGTGCTGGAGAAAATTGTTTATGACATTGCTGAAAGGGTAGATGGAGTAGATAAAGCTGCTGAAACTGCCAAACGTTTGTTGCAAGATATGGTTCAAAGGAGTATGGAACACAGCATGAACTGCATCCAGCATAGGGCTGCATCTTGTACTCCTTCTGTGATTCCATCCACTTGA | 1146 | 0.4546 | MGEGENLEVETETETEAEGTSTWNLGKHRQILELSEKLMNGNLNTKIEAAREIRKLVRKSSSSSKTRLKLAAAGVIQPLVFMLSSSDLDARQSSLLALLNLAVRNERNKVKIVTAGAMPPLVELLKMQNSSIRELATAAILTLSAAAPNKPIIATSGAAPLLVQTLKSGSVQGKVDAVTALHNLSTSIGNSTELLDASAVFPLINLLKECKKYSKFAEKATALLEILSNSEEGRNAITIADGGILTLVETVEDGSLVSTEHAVGTLLSLCLSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARTLLDLLRDSPPEKRLTSSVLEKIVYDIAERVDGVDKAAETAKRLLQDMVQRSMEHSMNCIQHRAASCTPSVIPST* | 382 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr9g1082 | 381 | SMART | arm_5 | 104 | 145 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | SMART | arm_5 | 146 | 186 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | SMART | arm_5 | 230 | 271 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | SMART | arm_5 | 63 | 103 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 198 | 242 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Apr9g1082 | 381 | Gene3D | - | 21 | 377 | IPR011989 | - | |
Apr9g1082 | 381 | PANTHER | ARM REPEAT SUPERFAMILY PROTEIN | 20 | 347 | - | - | |
Apr9g1082 | 381 | PANTHER | U BOX DOMAIN-CONTAINING | 20 | 347 | - | - | |
Apr9g1082 | 381 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Apr9g1082 | 381 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 74 | 116 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | Pfam | Armadillo/beta-catenin-like repeat | 105 | 144 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 116 | 158 | IPR000225 | GO:0005515 | |
Apr9g1082 | 381 | SUPERFAMILY | ARM repeat | 34 | 331 | IPR016024 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr9g1082 | Apr-Chr9 | 20267790 | 20273035 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr9g1082 | 1 | 314 | U-box Gene Family | AT3G54790 | 36.308 | 2.51e-40 | 150 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr9g1082 | K08332 | - | gmx:100782472 | 611.683 |