Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1077 ATGGGTGCTATTGTGGAGTGTTGCCCGCCACCGCGTGGGGACGAGCTGGCGGTGTTGTCTCTCAACACGTTACCGTTAGGGTTCCGTTTCCGTCCAACCGATGAAGAGCTTATTGATTACTACCTGCGCTTGAAGATCAACGGAAATGGTGATGATGTTTGGGTCATCCGTGAAATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCCGAGTGGTTCTTCTTTTGTCCGCAGGACCGGAAGTATCCGAATGGGCACCGGTTGAACCGAGCTACGAATCATGGGTATTGGAAAGCAACAGGGAAGGATCGCAAGATTAAGTCTAGCTCCACCTTGATTGGAATGAAGAAGACTCTGGTTTTCTATACTGGTCGTGCTCCCAAGGGGAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCCTCAAGGAGCTTGATGGTACCAATCCTGGACAGAATCCATATGTCCTTTGTCGATTATTTAAGAAACAAGACGAGAGTCTTGAAGTTTCAAATGGTGATGAAGTGGAGCGGATTGCTTCAACTCCTATGACCGCCAATTACTCTCCTGAAGAAATACAATCTGATTCAGCTCTGGTTCCAGTATCTTCTTCACAGGTTACAGATGATAAGCCTCTAGCAGTTATAACTGAGAACTCTGAGGAAGCAGTATCCAACATGATAATCCCAGTTGATTGCCATAGCGACGGGTGTGATGTTTATGATGCACAATACCAACTTGTAGAATCAGTTGCGGAGGAGGATCAGCCGCTGAATGTGAACATATTTTATGACCCAATAAATCAGCAATTAGATGACAAATTATTCTCTCCTGTCCACGCACATTTCCCACCAGAATTCAGTTATCAGCCTAACAATCAACCAGAACTTCTGTATGGCACAAATGAGCCAAATATTTCAGACTTTTTTGACTCAGTTGTTAATTGGGATGCATTCTCCCATGACGATTCCAGCAGTCTTGACCTGAGCTCAACCTTGATCAATGTTAAGGAATATGGATCGGGCAGTGACTCAGATGTGGAAATGGCCAATATGACACATCTGCAAGCATTACATGCTGATAATTCTAAGGATGCATTTGAACAGAAGAACAATATTGGATCATTTCAGAACAATTACCAAATGGCTTTCTCAACTGATGCTAGAATCAGCCAAGTGCACAATGTGGGCAATGATTATGAGCAATCAAGAAACTTTGATGCATTTGTTAACGGCGACACTGGAATCAGAATACGGTCTCGTCAAGGACGAAATGAGCAGGCAAACGCAAACCCTATGATATCACAAGGTATTGCACCAAGAAGAATACGATTGGGAGGATTTGTCAGGCAATCACCTGGTTCAAATGTAATACCAACAGTAGGGACATGCGCACCAGAAGACCATAATTCAAAAACCATCATTGCCGTGGAGAGCAAAGTTTCAGAAAACAATTTTGCTGCCGATAGTTCCACTGTTACTAATGATGTTGATGAACCAGAGAAACCAAAGCCAGAGAAGCCAAAGGCACCTCCTGAGTCAGCTGACACGAAAAAGATTTTACAGCAACACGTTGCAACTGCAGAATCCATCTCCGAGCCCAAGAACCTTCTATCGGGCCGAAAGGTCCGTCCCACGTCAAAGATTTCCTACAATCGTGCCATGTGGTCTTCTGTTCTTGCAGTTTCTGCCATTGTACTTGTCTCACTAGTACTTCTTGTTAATATATGGGGATATCTCAGACTTTAA 1782 0.4422 MGAIVECCPPPRGDELAVLSLNTLPLGFRFRPTDEELIDYYLRLKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSSSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLEVSNGDEVERIASTPMTANYSPEEIQSDSALVPVSSSQVTDDKPLAVITENSEEAVSNMIIPVDCHSDGCDVYDAQYQLVESVAEEDQPLNVNIFYDPINQQLDDKLFSPVHAHFPPEFSYQPNNQPELLYGTNEPNISDFFDSVVNWDAFSHDDSSSLDLSSTLINVKEYGSGSDSDVEMANMTHLQALHADNSKDAFEQKNNIGSFQNNYQMAFSTDARISQVHNVGNDYEQSRNFDAFVNGDTGIRIRSRQGRNEQANANPMISQGIAPRRIRLGGFVRQSPGSNVIPTVGTCAPEDHNSKTIIAVESKVSENNFAADSSTVTNDVDEPEKPKPEKPKAPPESADTKKILQQHVATAESISEPKNLLSGRKVRPTSKISYNRAMWSSVLAVSAIVLVSLVLLVNIWGYLRL* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1077 593 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 19 442 - -
Apr9g1077 593 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 442 - -
Apr9g1077 593 SUPERFAMILY NAC domain 19 174 IPR036093 GO:0003677|GO:0006355
Apr9g1077 593 Gene3D NAC domain 33 178 IPR036093 GO:0003677|GO:0006355
Apr9g1077 593 MobiDBLite consensus disorder prediction 506 525 - -
Apr9g1077 593 Pfam No apical meristem (NAM) protein 25 150 IPR003441 GO:0003677|GO:0006355
Apr9g1077 593 MobiDBLite consensus disorder prediction 497 529 - -
Apr9g1077 593 ProSiteProfiles NAC domain profile. 24 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1077 Apr-Chr9 20197027 20200947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1077 16 456 NAC Transcription Factor Family AT4G35580 43.016 3.08e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr9g1077 NAM 9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1077 - - gmx:100778903 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1077 9 20197027 20200947 Apr1g0587 1 7128745 7132284 PCT