Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1075 ATGAGAGTAATAAGCTTTTCTGCTGGCATAACAAAACCCAGTTTTTTGATTGGCCAAACAGAAATGCCTATTCTAACATTTGGTCATTCTAAGTTGAGTGCAACCCTAGCACTTAGGTTGCCATGTAACTGCATTAAGAGAATGGGGTTGATTACAAGGCTTCAGTATTCTGTTGCTGATAGAACATTGACTTCTAGCTCTGTGGATTCGCGTGTGTCTAAAACAACGGATTCCGGTAGAATCAATCGGAGGCGTGGTGGGTCCTCATCGCTGTATAGTCGTCCTAGTTTATCAGAAATGAAGAAAGAGAAGGAGGCAATAAGGGAAAAGGTTTATGAGTTCCTTAGGGGAATTGGCATTGTTCCTGATGAGCTTGATGGGCTTGACCTTCCTGTGACAGTTGATGTTATGAGGGAGCGCGTGGATTTTCTTCACAGTTTGGGGCTTACAATTGATGACATAAACAACTATCCACTTGTTCTTGGCTGCAGCGTCAAGAAGAACATGATTCCTGTGCTTGATTACCTCGGTAAATTGGGAGTCAGGAAATCCACAATCACGCGGTTCTTGCAGCGATACCCACAAGTGCTCCATGCTAGTGTGGTTGTGGATCTTGCACCAGTGATCAAGTATCTTAAGGGGATGGATATCAAGCCTGATGATATTCCTCGTGTTCTTGAGAGGTACCCTGAAGTGTTAGGATTTAAACTTGAGGGAACCATGAGCACATCAGTTGCCTACTTGGTTGGAATTGGTGTAGGAAGAAGAGAAATTGGAGGTGTCTTAACTAGATACCCAGAGATTTTGGGGATGCGAGTTGGTAGAATCATCAAGCCTTTTGTTGAATATCTGGAAAGCTTGGGAATTCCAAGGTTAGCCATTGCTAGACTGATAGAGCAACGACCTTATATTATTGGATTTAGGCTGGATGAGAAGGTTAAGTCAAATGTCAAATCCCTTGAAGAGTTTAATGTTAGGCAAACATCACTTCCATCTATAATCGCTCAGTATCCTGACATCATTGGAACTGACTTAAAGCCTAAACTTGTCAATCAGAGAAGTTTACTCAATTCTGTACTTGATTTGGATCCAGAGGATTTTGGCAGAGTTGTTGAGAAGATGCCACAGGTAGTTAACCTCAGCAGTGAACCTATGCTGAAGCATGTTGATTTTCTTAAGGGCTGTGGATTTTCCTTGCAGCAAATGAGGCAGATGATTGTTGGATGCCCTCAATTACTTGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTCCAAATGGAGATGAAAAGGCCTTTGGAAGACTTGGTTACTTTCCCAGCATTTTTCACTTATGGTCTGGAGTCAACTATAAAACCTAGGCATAAACTGGTTGACAAGAAAGGATTGAAGTGTTCTCTGTCATGGATGCTTAATTGTTCTAATGAGAAATTTGATCAACGAATGGACTATGATACTATTGACATGGAAGAGATGGAAATGGAACCATCCTTTGACATGAATTCACTGATTCAACCAAGGAGTGATGAATCAGATTCTGATTATGAAGATAGTGATGAGGATAATGAGTAG 1578 0.4106 MRVISFSAGITKPSFLIGQTEMPILTFGHSKLSATLALRLPCNCIKRMGLITRLQYSVADRTLTSSSVDSRVSKTTDSGRINRRRGGSSSLYSRPSLSEMKKEKEAIREKVYEFLRGIGIVPDELDGLDLPVTVDVMRERVDFLHSLGLTIDDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTITRFLQRYPQVLHASVVVDLAPVIKYLKGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGGVLTRYPEILGMRVGRIIKPFVEYLESLGIPRLAIARLIEQRPYIIGFRLDEKVKSNVKSLEEFNVRQTSLPSIIAQYPDIIGTDLKPKLVNQRSLLNSVLDLDPEDFGRVVEKMPQVVNLSSEPMLKHVDFLKGCGFSLQQMRQMIVGCPQLLALNIDIMKLSFDYFQMEMKRPLEDLVTFPAFFTYGLESTIKPRHKLVDKKGLKCSLSWMLNCSNEKFDQRMDYDTIDMEEMEMEPSFDMNSLIQPRSDESDSDYEDSDEDNE* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1075 525 Gene3D Transcription termination factor 3, mitochondrial 138 277 IPR038538 -
Apr9g1075 525 Gene3D Transcription termination factor 3, mitochondrial 278 489 IPR038538 -
Apr9g1075 525 PANTHER CGI-12 PROTEIN-RELATED 48 514 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 Pfam mTERF 173 480 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 MobiDBLite consensus disorder prediction 67 97 - -
Apr9g1075 525 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 48 514 - -
Apr9g1075 525 SMART mt_12 187 218 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 368 398 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 435 466 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 403 434 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 88 121 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 223 254 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 SMART mt_12 331 363 IPR003690 GO:0003690|GO:0006355
Apr9g1075 525 MobiDBLite consensus disorder prediction 500 525 - -
Apr9g1075 525 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1075 Apr-Chr9 20178042 20182923 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr9g1075 mTERF 7e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1075 K15032 - gmx:100785223 850.892