Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1072 ATGGGAACTGTGAAGGAATGGTTCACATCATCTCAGGCTCTTTTGAGCATGTTACTGGTGCAAGTGTTTGCAACTGGGATGCAGCTCCTATCAAGGGTCATATTGGTGCAAGGCTCTTTCATTTGTGCACTTATTGCATATCGTCACATTGTTGCTGCTATTTGTGTTGCACCCTTTGCACTCTACTTTGAAAGAGGCCGCACAAAGAAGTTCAGTGGGAAAGTTTGGTTTTGGCTCTTCATTAATGCATTAATGGGTATGACTATGGCTCAAGGATTGTTCTATTATGGTCTGCGAGACACTTCAGCTACTTACTCAGTCAACTTTCTCAACTTAATTCCTATATGCACTTTCATTACCTCTATCACATGCAGAATGGAGAAACTGGCGCTGCAAACATGGGCTGGTAAAGCTAAGTGTATAGGGGCAATTATGTGTGTTGGGGGAGCATTAGCTACCTGTCTTTACAAAGGGAAGGAATTTTATCTTGGTCATCATAATCATCATACTCATACTGCTGTTACAGCACACAAAACTTACATGCTTAGGGGCACTTTCTTTTTAATTGGCAGCTGCTTCTCATACACAGCTTGGTTCATTGTGCAAGTCAAGTTGCTTAAAGTATTTCCTTTGAAGTATTGGGGAACAATGCTAGCATGCCTTTTTGCTACAATTCAATCAGCAGTATTTGGGGCATTCATAGATTCTAGTAAAGCTGCTTGGAAATTAGAATTGAATCTACAACTGATCACTATAGTGTACTCGGGTGCACTGGCTACTGCTGCTACGTTTTGCTTATTATCTTGGGCAATTACACTCAAAGGACCTACTTATCCTCCCATGTTCAATCCCCTTGCTCTTATTTTTGTGGCCATATCAGAAGCTATCATACTTGGAGAACCATTAAGAGTTGGAACGTTGTTGGGCATGGTTTTGATCATAATGGGATTGTACTCCTTTTTGTGGGGCAAACAGAATGAGATTCAGCATTTGCCTCAACCCAATGTATCAGCTGCAGAGGTATCAACAAACGTGCCTGATGAACCTGTCGTGGCGCAAGCAACGGCCACGGTGGTGCCAAGTTCTTCACCTATGGAAAGTGTGGTTCTTGAAATTGAAAGGACAAACAAAATTTGA 1137 0.4186 MGTVKEWFTSSQALLSMLLVQVFATGMQLLSRVILVQGSFICALIAYRHIVAAICVAPFALYFERGRTKKFSGKVWFWLFINALMGMTMAQGLFYYGLRDTSATYSVNFLNLIPICTFITSITCRMEKLALQTWAGKAKCIGAIMCVGGALATCLYKGKEFYLGHHNHHTHTAVTAHKTYMLRGTFFLIGSCFSYTAWFIVQVKLLKVFPLKYWGTMLACLFATIQSAVFGAFIDSSKAAWKLELNLQLITIVYSGALATAATFCLLSWAITLKGPTYPPMFNPLALIFVAISEAIILGEPLRVGTLLGMVLIIMGLYSFLWGKQNEIQHLPQPNVSAAEVSTNVPDEPVVAQATATVVPSSSPMESVVLEIERTNKI* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1072 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
Apr9g1072 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Apr9g1072 378 Pfam EamA-like transporter family 14 146 IPR000620 GO:0016020|GO:0016021
Apr9g1072 378 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
Apr9g1072 378 PANTHER WAT1-RELATED PROTEIN 11 341 - -
Apr9g1072 378 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1072 Apr-Chr9 20127362 20132483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1072 15 325 Nodulin-like Gene Family AT1G09380 34.483 6.80e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1072 - - gmx:100782551 557.755